| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2744 |
|---|
| Symbol | |
|---|
| ID | 4270213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 3112236 |
|---|
| End bp | 3114818 |
|---|
| Gene Length | 2583 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638127506 |
|---|
| Product | RND efflux transporter |
|---|
| Protein accession | YP_743574 |
|---|
| Protein GI | 114321891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1033] Predicted exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.343287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGCAC GGCTGACGGA CTGGTGTATG GACCACCGCC GGTGGATCTT CGCCGCCATG
GTGCTGATGG TGGTGGTCCT GGGTGCAATG ATTCCGCGCA TCCAGATCGA CACCGATCCC
GAGAACATGC TGCCGGCGGA CCAGCCGGAC CGGGTGCTCC ACAATCAGGT CCAGACCCAG
TTCAACCTCC ACGACATGAT CGTCGTCGGC CAGGTGAACG ACGTCCACGC CGACGGCGTC
TTCAACCCCG AGTCGCTGGC CGCCCACTAC CACCTGACCC GCGCCATCGA GCAGATCGAC
GGGGTGGTGA GCCGTGATCT GCTCTCCATG GCGGCGGTGG ACAATGTGGA GCAGGCCGCT
CCCGGCACCA TCGACTACGA TTGGCTGATC CCCGCGCCGC CGGCCACCCC GGCAGAGGCG
GAGCGCATCC GCACCGCAGT GGCCCGGTTG CCCATGTATC AGGGCACGCT CGCCTCGGAA
GACGGCACGG CGGCGGCGAT CTTCGTGCCG GTGGAAAGCA AGGACCAGAG CCACCGGATC
GCTCAGGAGA TCCGCGCCGT GATCGACGGG CTGGGGGTGG ATGACGCCTT CCATATCACC
GGGCAGCCGG TGGCGCAGGA TACCTTCGGT GTGGAGATGT TCCAGCAGAT GGCCATTTCC
GCGCCGCTGG CGGGGCTGAT CATCTTCCTG GTGATGCTCT ACTTCTTCCG CAGCGTGCCC
ATGGTGGTGG CCCCCATGCT GCTGGCCATG GCCACGGTGA TCTCCACCAT GGGGCTGCTG
ATCGGCACGG GCTTCACCGT GCACATCATG AGCTCCATGA TCCCGATCTT CCTGATGCCG
ATTGCGGTGG TCGCCTCGGT CCACGTGCTC TCCAACTTCG CCGACCGCTA CCGGCCCGGT
GACGACCCGC GGGCGGTGAT GCGCGGGGTC ATGGACCGGC TGTTCAAGCC CGTGCTGTTC
ACCGCCCTGA CCACCGGCGT CGGCTTCGCC TCGCTGCTGT TCACCCCCAT CCCGCCGGTG
CAGGTATTCG GCGGTTTCAT CTCCTTCGGG GTGCTGGTGG CGCTGGTCTT GACCCTGACC
TTCATCCCGG CCTACACCGC CGCGCTGCCG CGCCGTGCCC TGGACAGGAT GTCCACGCGC
ACGGCCCAGG ATGGCGAGGC GGGCAGCACC GCCAGGCTGT GCCACGTGCT GCAGGCCGGT
GGTCGCCAGG CCGTCCGCCA CCGTGGATTC GTCCTCGGGG GCTTGGCGGT GCTGGTGGTG
GTGGCCGTCT ACGGCATCTC TCAGATCCAG ATCAATGACA ACCCCACCCG CTGGTTCAAG
TCCAGCCACG ACATCCGGAT CGCCGATAGC GTGCTCAACG AGCGTTTCTC CGGCACCTAC
GAGGCCTACC TGCGCCTTCG CCAGACCGGC CAGGACGCAC TGGAGAGCGA GCTGCGCACC
CGCGCTGAGG CGATTGTCGA TGAGGCGGAG GCCGAGGGCT TCGGCATCAG CGACCGCTGG
CAGGCGCTGT GGGCGGCCCA CCGGGGCGAG GCCCCGCTGG GGGACCGGTT GGAGCGCCTG
GCGGTGGAGA TCGACGACCT GCTGTTCACG GTGGACCTGG ACGAGGCGGT CCATTGGGAG
CGGCTGCTCG ACCTCGTGGA GGCGGCCCGA ACGGACAGCC GCGCCTTCCA GAAGCCCGGG
CATCTGGCCT GGATGGCGGC GTTGCAGGCC CACCTGGAGG CCGGCGGCCA CATCGGCAAG
GCCGGTTCGT TGGCGGACCT GGTGAAGACC ATCAACCGTG AGCTGGTCAG CGGTGAGCCG
GAGGACTACC GGCTGCCGGC GAGCGCCGGT GGCGTCTCGC AGGCGCTGCT GAGCTTCCAG
AGCTCGCACC GCCCGCACGA TCTTTGGCGT TTCGTGACCC CGGATTTCAC CGAGGCCAAT
ATCTGGCTGC AGCTCCCCAG CGGCGACAAC CAGGACATGG GGCGGGTGCT GGAGGCCGTG
GATGCCTTTA TCGCGGACAA TCCGCCGCCC GAGGGGGTGG AGTGGGACTG GGCCGGCGCC
ACCTATATCA ACCTGGTCTG GCAGGGGGAG ATGGTGGCCG GCATGCTCCT CGCCCTGCTC
TCCGCCTTCG TCGTCGTGCT CCTGATGATG ATCGGCCTGT TCCGCTCCAT CACCGTGGGG
GCGCTGGCGA TGCTGCCGCT CACGGTCACC ATCGCCGCCA TCTACGGCGT CATGGGGTTG
GTCGGCAAGG ATTACGACAT GCCCGTGGCG GTGCTGTCCT CGCTGTCCAT CGGGTTGTCG
GTGGACTTCG CCATCCACTT CATCCAGCGC TGCCGCATGG CCCTGGACGA GGTGGGCGAT
TGGCGCCTGG CGTTGGACCG GGTCTTCCAG GAGCCCGCCT GCGCCATCAC CCGCAACGCC
GTGGTCATCG CCGTCGGCTT CCTGCCGTTG CTGGCCGCGC CGCTGATGCC CTACGTCACG
GTGGGTATCT TCCTGGCCAG CATCATGGCC GCCTCTGCGG TGGTCACCCT GTTCGCCCTA
CCGGCCCTGA TCGCCTACGC CCACCCCGTG CTCTTTCCGC GCGCCACGGG GCGGGGGGCC
TGA
|
|---|
| Protein sequence | MGARLTDWCM DHRRWIFAAM VLMVVVLGAM IPRIQIDTDP ENMLPADQPD RVLHNQVQTQ
FNLHDMIVVG QVNDVHADGV FNPESLAAHY HLTRAIEQID GVVSRDLLSM AAVDNVEQAA
PGTIDYDWLI PAPPATPAEA ERIRTAVARL PMYQGTLASE DGTAAAIFVP VESKDQSHRI
AQEIRAVIDG LGVDDAFHIT GQPVAQDTFG VEMFQQMAIS APLAGLIIFL VMLYFFRSVP
MVVAPMLLAM ATVISTMGLL IGTGFTVHIM SSMIPIFLMP IAVVASVHVL SNFADRYRPG
DDPRAVMRGV MDRLFKPVLF TALTTGVGFA SLLFTPIPPV QVFGGFISFG VLVALVLTLT
FIPAYTAALP RRALDRMSTR TAQDGEAGST ARLCHVLQAG GRQAVRHRGF VLGGLAVLVV
VAVYGISQIQ INDNPTRWFK SSHDIRIADS VLNERFSGTY EAYLRLRQTG QDALESELRT
RAEAIVDEAE AEGFGISDRW QALWAAHRGE APLGDRLERL AVEIDDLLFT VDLDEAVHWE
RLLDLVEAAR TDSRAFQKPG HLAWMAALQA HLEAGGHIGK AGSLADLVKT INRELVSGEP
EDYRLPASAG GVSQALLSFQ SSHRPHDLWR FVTPDFTEAN IWLQLPSGDN QDMGRVLEAV
DAFIADNPPP EGVEWDWAGA TYINLVWQGE MVAGMLLALL SAFVVVLLMM IGLFRSITVG
ALAMLPLTVT IAAIYGVMGL VGKDYDMPVA VLSSLSIGLS VDFAIHFIQR CRMALDEVGD
WRLALDRVFQ EPACAITRNA VVIAVGFLPL LAAPLMPYVT VGIFLASIMA ASAVVTLFAL
PALIAYAHPV LFPRATGRGA
|
|---|
| |