| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2682 |
|---|
| Symbol | |
|---|
| ID | 4269557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 3037765 |
|---|
| End bp | 3039360 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638127441 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_743512 |
|---|
| Protein GI | 114321829 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00000000577171 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGT ACAGGAACGA CATCGAGGAA GTTGCCGGCC TGCGCCAGGC GCATGAAGGC
ACCTGGGACG CGATCAACCC CGAATACGTG GCCCGCATGC GCGCCCAGAA CCGGTTCAAG
ACCGGTCTGG ACATCGCCAA GTACACCGCC AAGATCATGC GCCAGGACAT GGCCGAGTAC
GATGCCGATC CGGCCCAGTA CACCCAGTCC TTGGGGTGCT GGCACGGCTT CGTCGGCCAG
CAGAAGATGA TCGCCATCAA GCGTCACTTC GGCACCACCA ACAAGCGCTA CCTCTACCTC
TCCGGCTGGA TGGTTGCGGC GCTGCGCTCC GAGTTCGGCC CGCTGCCGGA CCAGTCCATG
CACGAGAAGA CCGCCGTGCC GGCGCTGATC GAGGAACTCT ACACCTTCCT CCGCCAGGCC
GACGCCCGTG AGATGAACCA CCTCTTCCGT GAGCTGGATG CGGCCCGCGA GGCCGGCGAT
GAGGCCAAGG CCAACGAGAT TCTCGACAAG ATCGAGAACT TCGAGACCCA CATCGTGCCG
ATCATCGCCG ACATCGACGC CGGCTTCGGT AACGAAGAGG CCACCTACCT GCTGGCCAAG
AAGATGATCG AGGCGGGTGC CTGCTGCATC CAGATCGAGA ACCAGGTCGC CGACGAGAAG
CAGTGCGGCC ACCAGGACGG CAAGGTCACC GTGCCCCACG CCGACTTCCT GGCCAAGGTC
CGCGCCGTGC GCTATGCGTT CCTGGAGCTG GGCGTGAACG ACGGCGTGAT CGTTGCCCGC
ACCGACTCCC TCGGCGCCGG CCTGACCAAG CAGATCGCCG TCACCGATGA GCCGGGCGAC
CTGGGCGACA AGTACAACAG CTTCCTGGAC GGCGATTACA TCGACAGCGC CGAGGACATC
AACAATGGCG ATGTGGTGGT CAAGTCCGAA GGCAAGCTGC TCAAGCCCAA GCGCCTCGCC
AGCGGCCTCT ACGAGTTCCG CAAGGGCACC GGCTTTGACC GCGTGGTGCT GGACTGCATC
ACCAGCCTGA AGAACGGCGC CGACCTGCTG TGGATCGAGA CCGAGAAGCC CCACGTCGGC
CAGATCGCCG AGATGGTCAA CGCCATCCGC GAGGAAGTGC CGAACGCCAA GCTGGTCTAC
AACAACAGCC CGTCCTTCAA CTGGACGCTG AACTTCCGCC AGCAGGTGTT CGATGCCTGG
AAGGAAGAGG GCAAGGACGT CTCCCAGTAC GACCGCGACA ACCTGATGAG CGCCGAGTAC
GACGACAGCG AGCTGGCGGC GGAAGCCGAC CGCTGGGTGC AGGAGTTCCA GCGCAAGGCC
TCCGCAGAGG CGGGTATCTT CCACCACCTG ATCACCCTGC CGACCTACCA CACGGCCGCC
CTGTCCACCG ACAACCTGGC CAAGGGCTAC TTCGGTGACC TGGGCATGCT GGCCTACGTG
GATGGCGTGC AGCGTCAGGA GATCCGCCAG GGCGTGCCCA CCGTGAAGCA CCAGGACATG
GCCGGCTCCA ACATCGGGGA CGACCACAAG GCCTACTTCT CCGGTGAGGC CGCGCTCAAG
GCCGGCGGGA AGGGCAACAC CATGAACCAG TTCTAA
|
|---|
| Protein sequence | MSQYRNDIEE VAGLRQAHEG TWDAINPEYV ARMRAQNRFK TGLDIAKYTA KIMRQDMAEY
DADPAQYTQS LGCWHGFVGQ QKMIAIKRHF GTTNKRYLYL SGWMVAALRS EFGPLPDQSM
HEKTAVPALI EELYTFLRQA DAREMNHLFR ELDAAREAGD EAKANEILDK IENFETHIVP
IIADIDAGFG NEEATYLLAK KMIEAGACCI QIENQVADEK QCGHQDGKVT VPHADFLAKV
RAVRYAFLEL GVNDGVIVAR TDSLGAGLTK QIAVTDEPGD LGDKYNSFLD GDYIDSAEDI
NNGDVVVKSE GKLLKPKRLA SGLYEFRKGT GFDRVVLDCI TSLKNGADLL WIETEKPHVG
QIAEMVNAIR EEVPNAKLVY NNSPSFNWTL NFRQQVFDAW KEEGKDVSQY DRDNLMSAEY
DDSELAAEAD RWVQEFQRKA SAEAGIFHHL ITLPTYHTAA LSTDNLAKGY FGDLGMLAYV
DGVQRQEIRQ GVPTVKHQDM AGSNIGDDHK AYFSGEAALK AGGKGNTMNQ F
|
|---|
| |