| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2681 |
|---|
| Symbol | |
|---|
| ID | 4269556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 3035976 |
|---|
| End bp | 3037223 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638127440 |
|---|
| Product | peptidase M42 family protein |
|---|
| Protein accession | YP_743511 |
|---|
| Protein GI | 114321828 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000000000914613 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAACC ACGCCATTCC GCCACCCTGG GTCCGGCCCA TGCCCGAGGC GCAGTTTCAG
CTCATGCGCC GGATCCTTGC AGCGCCCAGC CCCGTGGGAC TGGAGGCGGC CATGACGGAG
GGCGTGCTCT GCCCCCATTT CCGCTCCTTT GCCCCAGAGA GCTGGCAACT GCAGCGGTTC
CAGGGACACG CCGGTATCGT GCTGGACACC CATCCCGGTG ACGACGAGCG CTTCCGGCTC
ATGATTGTCG GTCACGCCGA CAAGATCCGC CTGCAGGTCC GGAGTATCGG CGACGACGGC
AAGGTCTGGA TCAACAGCGA CGGCTTTCTG CCCGCCACCC TGATCGGCCA CGAGGTGCGC
CTGTTCACCG AGAACCCCGG CCGTCCGGGC CACTACCGGG TGATCGACGG GGGCACGGTG
GAGGCCCTCG GCGCCATCCA CTTCGCCGAG CCGGAGCTGC GCAGTGGCGA AAAGGGGGTG
AAGAAAGAAC AGCTCTACCT GGAGCTGCAG GTGCACGGCG ATGACCGCAA GGCCCAGGTG
GAGCACCTGG GGGTCCGGCC CGGCGATACC CTGCTGCTCA ACCGGCCCAT CCGGCGCGGC
TTCAGCCCGA ATACCTTTTA CGGCGCCTAC CTGGACAACG GCCTGGGCAG CTTCGTCACG
GCCGAGGCCG CCCGGCTGCT GGTGGAGGCC GGCGCCCCGG CGAGCATCCG TGTGTTGTTC
GCCATTGCCG GGTATGAGGA GATCGGCTGC TTCGGCAGCC GGGTGCTGGC GGCCCACTAC
CGGCCGGATG CCCTGATCGC GGTGGACGTG GAGCATGATT ATCGGGCCGC CCCGCAGGTG
AGTGACCGGC GGCTGCCGCC CTTGGAGATG GGCAAGGGCT TTAGCCTGTC GGTGGGCTCC
ATCGTCAGTG AGCAGTTGAA CCAAGTGATC GAGGAGGGGG CTCGGAGCCG TGGGATCCCC
AGCCAGCGTG ACGTGGTGGG TCCGGATACC GGCACGGACG GCATGGCCGG GGTGCTGGCC
AATGTTGACT GCGCCGCTGC CTCAGTGGGC ATCCCCATCC GCAACATGCA CACCATCTCC
GAGACCGGCC ACACCTCGGA TGTGCTCGCG GCCCTGCACG GTGTGGTGGA GGCGGCCCTG
GCGCTGGACG CCGCCGGCAC GGACCCGGAG GCGCTGCGTC GGCGCTTTCG CGAACACCAT
CCGCGGCTGG ACCAGGCCGC CCCCCTGCGC CACCCGGGCC CCGCCTGA
|
|---|
| Protein sequence | MPNHAIPPPW VRPMPEAQFQ LMRRILAAPS PVGLEAAMTE GVLCPHFRSF APESWQLQRF
QGHAGIVLDT HPGDDERFRL MIVGHADKIR LQVRSIGDDG KVWINSDGFL PATLIGHEVR
LFTENPGRPG HYRVIDGGTV EALGAIHFAE PELRSGEKGV KKEQLYLELQ VHGDDRKAQV
EHLGVRPGDT LLLNRPIRRG FSPNTFYGAY LDNGLGSFVT AEAARLLVEA GAPASIRVLF
AIAGYEEIGC FGSRVLAAHY RPDALIAVDV EHDYRAAPQV SDRRLPPLEM GKGFSLSVGS
IVSEQLNQVI EEGARSRGIP SQRDVVGPDT GTDGMAGVLA NVDCAAASVG IPIRNMHTIS
ETGHTSDVLA ALHGVVEAAL ALDAAGTDPE ALRRRFREHH PRLDQAAPLR HPGPA
|
|---|
| |