| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2512 |
|---|
| Symbol | |
|---|
| ID | 4268766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2851466 |
|---|
| End bp | 2853157 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638127270 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_743342 |
|---|
| Protein GI | 114321659 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.477577 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACAAC CGCCCCAATC ACCGCCCGCC CCCTCACCTC GCCGGTCACA GCCGCGGGGC
CGCCGCCCCC GCCCCGCGGA CATCCGGGCG GTGCGGGCGG TATCCGGCGG CCTGCCCCCT
ACCCGGGACC TGCTCATCGA ACACCTGCAC TGCCTGCAGG ACCACTACGG CCACCTCAAG
GCCGAGCACC TGGTGGCATT GGCCCACGAA CTAAACCTCG CCCCGGCCGA GGTTTATGAG
GTGGCCACCT TCTACCACCA CTTTGACGTG GTCCACGACA ATGCGGCGCC ACCACCGCCA
ATCACCGTCC GCGTCTGTGA CGCCATCGGC TGCGCGCTCT CCGGCGCCGA TGACCTGGTG
CAGGCGTTGG AGGCCGGACT CGGGGACGGG GTGCGGGTCC AACGGGTGCC CTGCGTGGGC
CGTTGCGACC AGGCCCCGGT GGCGGTGGTC GGGTGCAACC CGGTGGGGCA GGCATCGCTG
GCGACGGTTC AGGCCCGGAT CGCGCAACGG GCGCTGCGGC CCGAGCTGCC GGCAGGCACC
GTCAGGTACA GCGCCTATCG CGCCGCCGGC GGCTACCGGG TCTTGGCCGA TTGCCTGTCC
GGTCGCCGTG AGCCCGCGTC TGTGATCGAC ACCCTGGAGC GGGCCGGCCT CCGGGGCATG
GGCGGGGCCG GTTTCCCCGC CGGGCGCAAG TGGCGCACCC TACGCGACCA GCCCGCCCCC
CGCCACGTGG TGGTGAACAT CGACGAGGGG GAACCCGGCA CCTTCAAGGA CCGCCACTAC
CTGGAATCGG ACCCCCACCG CTTCCTGGAG GGGGCCCTGA TCGCCGCCTG GGCCATCGAG
GCCGATGCGA TCTGGCTCTA CCTGCGGGAC GAATACGCCG CCGCCAGGGC CCTGCTGCGC
CAGTGTCTGG CCGAGCTGCA GGCCGATCCG CCCGGTCCCC TGCCCGCCAT GCACCTGCGG
CGCGGGGCCG GGGCCTACAT CTGCGGCGAG GAGTCGGCCC TGATCGAGTC CATCGAGGGC
AAGCGCGGCC TGCCCCGGCT CCGGCCGCCC CTGGTGGCCC AGGTGGGGCT CTTCGGCCAC
CCCACCCTGG CCCACAACCT GGAGACCCTG CACTGGGTGC GCGACATCCT GGCGCACGGC
GCGGACTGGT TCGCCGACCA GGGCCGGCAC GGGCGCCAGG GGCTGCGCAG CTACTCGGTG
AGCGGCCGGG TGCGCCACCC CGGGGTCCAC CTGGCGCCGG CCGGCATCAC CCTGCGCGAG
CTCATCGACG AGTACTGCGG CGGCATGGCC CCCGGGCACG AACTCAAGGC CTTCTTCCCC
GGCGGGGCCT CCGGCGGCAT CCTGCCGGCG GCCGCTGCTG ACACCCCGCT GGACTTCGAC
ACCCTGCAGG CCTACGACCC GCACTGCTTC ATCGGCTCGG CGGCGGTCAT CGTACTCTCC
CAACAGGACA GCGTGCGCGA GGCCGCCCTC AACGCCATGC GCTTCTTCCA GCACGAGTCC
TGCGGCCAGT GCACCCCCTG CCGGGTGGGC ACCGCCAAGG CCGCCGCCCT AATGGCGCGG
CCGGTCTGGG ACGCGCCCCT GCTGGAGGAG CTGGCCGACT GCATGGCCGA CGCCTCCATC
TGCGGCTTGG GCCAGGCGGC GCCCAACCCG CTGCGCTGCG TGCTCAAGTA TTTCCCGGAG
GAGGTGCGCT GA
|
|---|
| Protein sequence | MPQPPQSPPA PSPRRSQPRG RRPRPADIRA VRAVSGGLPP TRDLLIEHLH CLQDHYGHLK
AEHLVALAHE LNLAPAEVYE VATFYHHFDV VHDNAAPPPP ITVRVCDAIG CALSGADDLV
QALEAGLGDG VRVQRVPCVG RCDQAPVAVV GCNPVGQASL ATVQARIAQR ALRPELPAGT
VRYSAYRAAG GYRVLADCLS GRREPASVID TLERAGLRGM GGAGFPAGRK WRTLRDQPAP
RHVVVNIDEG EPGTFKDRHY LESDPHRFLE GALIAAWAIE ADAIWLYLRD EYAAARALLR
QCLAELQADP PGPLPAMHLR RGAGAYICGE ESALIESIEG KRGLPRLRPP LVAQVGLFGH
PTLAHNLETL HWVRDILAHG ADWFADQGRH GRQGLRSYSV SGRVRHPGVH LAPAGITLRE
LIDEYCGGMA PGHELKAFFP GGASGGILPA AAADTPLDFD TLQAYDPHCF IGSAAVIVLS
QQDSVREAAL NAMRFFQHES CGQCTPCRVG TAKAAALMAR PVWDAPLLEE LADCMADASI
CGLGQAAPNP LRCVLKYFPE EVR
|
|---|
| |