Gene Mlg_2416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_2416 
Symbol 
ID4270003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp2748268 
End bp2748606 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content66% 
IMG OID638127174 
Productanti-sigma-factor antagonist 
Protein accessionYP_743246 
Protein GI114321563 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.015086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGTGA ACGCCTACAC CGCCCGCAAC GGCAAGGAAC TGGTGCTCGA GATCCAGGGC 
CGGTTCGACT TCGGGCTGCA CAAGCCCTTC CGTCGGGCCT ACCGGGGCCG CGCCGGCCTG
GAGACCTACC GGGTGGATCT GCGTCAGGCG GAATCCATGG ACAGCTCCGC GCTCGGCATG
CTGCTGCTGC TCCGCGAGCA TGCCTCCGGT CAGGGCGCTC GCGTGGTATT GCGCCACTGT
CAGGAGGAGG TGGATGAAAT CCTGCGCACG GCCAATTTCC AGAAGCTCTT CGAGATCGAG
CGCAGCCCTG CGCCGCCGCG GCCGGTGAAG GCTGAATAG
 
Protein sequence
MSVNAYTARN GKELVLEIQG RFDFGLHKPF RRAYRGRAGL ETYRVDLRQA ESMDSSALGM 
LLLLREHASG QGARVVLRHC QEEVDEILRT ANFQKLFEIE RSPAPPRPVK AE