| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1622 |
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| Symbol | |
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| ID | 4269354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1851867 |
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| End bp | 1854341 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638126379 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_742458 |
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| Protein GI | 114320775 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACGG GCAACCCAGC GATCGCCCAT CCGGCGCACA CAGCCCCCCG AGGATGCCGG
GTATGCCGGC GCATCACCGC TGTGGTCTTC GTGTCCATTA TCGCCATTGA GGCCATTATC
CTCTTCCCTT CCTATCGGAA CCACGAGGCG ACACTGCTGG CGAACATTGA AGCCCAAGGG
CTCGCCGCAG CCCGAGCGGG CCTGCCCTCC GGTCCTCACG ACCGGCCGGC AATGGTCCAT
CTCCTGGACA ACACCCCGAT CGCCGGTATC GAGTGGCGGG AAGAGGAGGG ACGCGCATCT
TCTGTAGGTG CGCCCCTTGC GGCGACCGAT GCCCGGCCGG AGGGTCGCCT GCCTGAGCCC
CGCGAAGGGG GCCGGAACGG GGCCCTGATG GTCCACTGGA CCCCGGAACA GCTCAACCGC
GACTACGGCG TCCGGGCACG GCTGGACACG ACCGGGATTG ACGCCGAGCT GCGCGCCTTC
CTGCTGCGCA TCGCCGCCCT CGTCCTGCTG ATCGCCTTGT TCGTCACCGC CGTCACGCTG
GCGGTGCTGG ACCGGCTGGT ATTCCGCCCC TCGCGCCGTT TGTACCGCCA CATGTTGGCC
GCTGGCGCCG ACCCCGACCA CCCCCTGGCC TACCGCCTCA ACAGCAACAG GGACGATGAG
CTGGGGGCCG CCAGCCAGGC CTTTGACCAC ATGCTGGAAC GCCTGGCCAG GGACCGCACC
GCACTCCGCC AGCGGGAACG GGACCTGCAG ACCATGAACA CCACTCTGGA GGCCCAGGTG
ACCAGGCGGA CCGCCGCCCT CACCGAAGCC AATCACCGAC TGCAACAGGA GGCGAAGGAG
CGCCAGGCCG CTGAACAACA GGCCCGACGC CTGGCCCGGT TCCCCGATGA GAACAGCAAC
CCGGTGCTGC GGGTGAACCC CGATGGGGAG ATCCTTTACG CCAACCCGGC CGCAATCCCC
CTGCTCCGCC ACTGGGAGGA CGAACAACGG CTGCCCGCCG ACTGGCAGCC CCGGCTCACG
GCAGCTACGA CGGCCGGCCG GGTCACGTAC GAAGAGGTCG CTGTCCAGGG CCGCTGGTAC
CTGATGGCCA TCAATCCGAT CCCTGAAGAG GGTTATCTCA ACCTCTACGG GGTCGATATC
ACCGACCGCA AGCGCTTTGA GGCGGAGCTG GCAAAGCGCA ATACCGAGGA CGCGCTGACC
GGTCTGCCCA ACCGTCAGGT GTTCCGTGAC CGGGTCGGTC AGGCCCTCCG TGAGAGGGCG
TCGGACCGCG GTCGGGCCGC CGTACTGCTC ATCCGGATCG AGAACATGGA CCTCATAAAC
GGCCTGGGAG GCCACCAGGC CGGCGATCTC GTGCTTACCG CGCTGGCCCG ACGCCTACGG
CAAGCAGTTG CCCCCGATCA GACCCTGGCC CGTCTGGGCG AGGAGGTGTT CGCCCTGCTC
ATCCCCAAGG TGGCCTCGGT GGATGAGCTG GCACGGCTGT CCGAGCAACT GCTTGGGGTC
CTCAACAGCA GTGTCACCTC CCAGGGCCAT GAGTTCGCCA GTCGCGCTTC TGGTGGCTGG
GCCATCTACC CCCATGACGG TGCCGACACC GCCACCCTGC TCCGGAATGC CCAGTTGGCC
GCCCACCGGG CCAGCCGCCA GGGCGAGCGC CAGCGCTACC TGTTCTTCGT GGAGGGGCTG
AACGAGGCGG TGGAGAGCCG CCAGCGGCGG CTGCGCGAAC TCCGGAACGC GATCGATGAC
GGGGGGCTGA CCCTCTGGTT TCAGCCCCAG CTCAGCAGCG ACCGGAGGAG GCTGAGCGGC
CTGGAGGCAC TGGTCCGTTG GCCCCATCCC AGCGATGGCC TCCTCGCCCC CGATGCCTTC
ATCCCGCTCG CGGAGGAGCA TGACCTGATC ATCCCCCTGG GCGAGTGGGT GCTCAAGGCT
GCCTGCAGGC AACTCCACGA ATGGCAGCAG TTGGGCCTGC CCGTACCACG ACTGGCGGTC
AACCTCGGGG CCCGTCACCT GCTCGACAGC CGCCTGCCGG GGTTCGTCGC GGATCTGCTG
CGCGACTACG AGCTGCCCGG TCACTGCCTG GAGGTGGAGG TGACGGAAAG CACGGTGATG
GAGGACATCA CCCGGAGCGA GGAGGTCCTC TCCCGGCTGG TGCGCCTGGG GGTCCAGGTG
GCGGTGGATG ACTTTGGTAC CGGCCACTCC TCCCTGGCCT ATCTCAAACG CCTGCCGATT
CAACGCATCA AGATCGACCG CTCCTTCATC GCCGGGCTCC CCGACGATGC CCAGGACCGG
GCCATCTGCC GGACCATCGC CGACCTCAGC CACAGCCTGG GCTTGCAGGT CGTCGCCGAG
GGGGTGGAGA CAACCGCTCA GGCAGCGGCC CTGCAGCAGA TGGGTTGCAA TGACCTGCAG
GGCTTCCTCC TTGCCCGCCC CGGCCCGATC ACCCGGATCA CCCATTGGCT GCGCCACGAG
GCCCCCAGAC CATGA
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| Protein sequence | MHTGNPAIAH PAHTAPRGCR VCRRITAVVF VSIIAIEAII LFPSYRNHEA TLLANIEAQG
LAAARAGLPS GPHDRPAMVH LLDNTPIAGI EWREEEGRAS SVGAPLAATD ARPEGRLPEP
REGGRNGALM VHWTPEQLNR DYGVRARLDT TGIDAELRAF LLRIAALVLL IALFVTAVTL
AVLDRLVFRP SRRLYRHMLA AGADPDHPLA YRLNSNRDDE LGAASQAFDH MLERLARDRT
ALRQRERDLQ TMNTTLEAQV TRRTAALTEA NHRLQQEAKE RQAAEQQARR LARFPDENSN
PVLRVNPDGE ILYANPAAIP LLRHWEDEQR LPADWQPRLT AATTAGRVTY EEVAVQGRWY
LMAINPIPEE GYLNLYGVDI TDRKRFEAEL AKRNTEDALT GLPNRQVFRD RVGQALRERA
SDRGRAAVLL IRIENMDLIN GLGGHQAGDL VLTALARRLR QAVAPDQTLA RLGEEVFALL
IPKVASVDEL ARLSEQLLGV LNSSVTSQGH EFASRASGGW AIYPHDGADT ATLLRNAQLA
AHRASRQGER QRYLFFVEGL NEAVESRQRR LRELRNAIDD GGLTLWFQPQ LSSDRRRLSG
LEALVRWPHP SDGLLAPDAF IPLAEEHDLI IPLGEWVLKA ACRQLHEWQQ LGLPVPRLAV
NLGARHLLDS RLPGFVADLL RDYELPGHCL EVEVTESTVM EDITRSEEVL SRLVRLGVQV
AVDDFGTGHS SLAYLKRLPI QRIKIDRSFI AGLPDDAQDR AICRTIADLS HSLGLQVVAE
GVETTAQAAA LQQMGCNDLQ GFLLARPGPI TRITHWLRHE APRP
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