| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1572 |
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| Symbol | |
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| ID | 4270594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 1797888 |
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| End bp | 1799612 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126329 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_742409 |
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| Protein GI | 114320726 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCA ACCCTGACGC GGGTTCAAAC CTATTGACCT CGATGGCGCA GACGCAATTT
GATCTGCTGG CGGACAGCTT CCCCGGGGAG GTCCTGTTCT GCCGGCTCGG GATGGATGGG
GCAATCCGCT TTACCGCGCG TGGCCCCGGG CTGGCACGGC TCCACCGCGT GGGTGAGGGC
AGTGGCCCCT GGGCGGAACA CCAGCTCTTC CGCTTTGTGC CGGAGCCCGA CCGCAAGCGA
TTGCTGGAGA GCCTCTATCA CTCGGCCAAG CGGCTCACTC CCTGGCGCTG TGAGTACATG
GTCAAGGCGG GCCGGCGGGC CCGTGTGCAC CTGGAGCTCT CCGCCCGTCC GGAGTCGCGG
CGGGACGGCG GGGTGGAGTG GGTGGGCTGT GTGCTGGACG TCTCCGAGCG CTACTACCTG
GAGCAGGCCC TGCTTCGGGC GCAGGAGAAG TTCCGCTTCC TCGCCGAGAG TACCCGCGAC
CTAGTCACCC TCCACGCCCC CGACGGCGAG TTCATGTACG TCTCCCAGTC GGTCCGCCAC
CTGCTGGGCC ACACACCGGA TCAGCTCACC GGGGTCAGCC CCCTCGACTA CGTCCACCCG
GGCGACGTGG AGCGGGTGCG CGACCTGTTC CGCAAGCTCG CCGTCCAGGG CGAGACCGAG
CGCGACGTGC AGTACCGCAT CCGCCGCCGG GACGGCAGCT ACGCCTGGCT GGAGAGCCGG
GCCACCGCCT ACCTGGACGG CGAGGGCCAG CTGATCGCCC TGCAGTGCAC CTCCCGGGAT
ATCACCGAGC AGCGGGCGCT GATGAGTGCA TTGGTGGAGA GCGAGCAGCG GGCAACCGGC
CCCGTCGGTC CGGCGCTGGA GTTCTTCTGG GAGGTGGATG AGCACGGCCG CTACATGTGG
GTATCCGCCC AGGCGGAGAC CATCGCGGGT ATCCCGCCGG TGATCCTGGA GACCCTGAGC
CCCTTCGACC TGATGCCGCC GGAGGAGCGC ACCCGGGTCT GGAACTGGTT CAGCGGCCTG
CGGGACAGCG GACGGGGCTT CTCGGAGATC GAACATCGGG TGCTGCGCAA CGGTGAGCTG
CGCTGGTGGC GGGTGAGTGG CATGCCGCTG TTCAGCGCCA CCGGGGAGCT CACCGGTTAT
CGCGGGGCGG CGCGGGATGT CACCGAGCAG AAGCAGGTTC AGGGGCGACT CACCCAGATG
GCCGGCGCTG AACCGGTCAG TGGGCTGCCC AATGAACGGG TGCTCGCGGT GCACTTCGAG
CGCGCCCAGA CCCGCGCCAG CATCAAGGAC CTGGGCATTG TCATCGTCCT GGTGCAGGTG
GAGGTGGCGG AGCCGTCCGG TGATGCGGCG CTTGAGGCCC TGGTGGCGGC GCGGTACAGC
CTGATCATCC AGCGCCTGGA GGCCCTGCTG CGGCCATCGC AGACCCTGGC CTGCATCGAG
CCCGGGCAGT TCGTGATGCT GCTGCCGGAC CTGGTGCGCG ACGAGGCCGT TTCGGTGGCC
CAGCGCATGC GCGCCCGGGT CGAGGAGAGC CTGCGTCGCT CGGGGCGGGA GCAGCCGGTG
GGCCCGGGCT GGGCGCACGT GGGGACCGCC ATCTTCCCGG GGCAGGGGGA GATGCTGGCC
GCACTGCTGA GCCGGGCGCG CCAGCAGTCC GAGCCAGTGC GCCTCGCGGA GGAGGATTCC
TCGCTCGGTG AGGGGGAAGA CGACGACCGT GGAGACGGGT GTTGA
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| Protein sequence | MTSNPDAGSN LLTSMAQTQF DLLADSFPGE VLFCRLGMDG AIRFTARGPG LARLHRVGEG
SGPWAEHQLF RFVPEPDRKR LLESLYHSAK RLTPWRCEYM VKAGRRARVH LELSARPESR
RDGGVEWVGC VLDVSERYYL EQALLRAQEK FRFLAESTRD LVTLHAPDGE FMYVSQSVRH
LLGHTPDQLT GVSPLDYVHP GDVERVRDLF RKLAVQGETE RDVQYRIRRR DGSYAWLESR
ATAYLDGEGQ LIALQCTSRD ITEQRALMSA LVESEQRATG PVGPALEFFW EVDEHGRYMW
VSAQAETIAG IPPVILETLS PFDLMPPEER TRVWNWFSGL RDSGRGFSEI EHRVLRNGEL
RWWRVSGMPL FSATGELTGY RGAARDVTEQ KQVQGRLTQM AGAEPVSGLP NERVLAVHFE
RAQTRASIKD LGIVIVLVQV EVAEPSGDAA LEALVAARYS LIIQRLEALL RPSQTLACIE
PGQFVMLLPD LVRDEAVSVA QRMRARVEES LRRSGREQPV GPGWAHVGTA IFPGQGEMLA
ALLSRARQQS EPVRLAEEDS SLGEGEDDDR GDGC
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