| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1393 |
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| Symbol | prfC |
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| ID | 4269585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1596229 |
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| End bp | 1597803 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638126149 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_742232 |
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| Protein GI | 114320549 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.263078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.346403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC AGGACATCCA GCGCCGCCGC ACCTTCGCCA TCATCTCCCA CCCGGACGCC
GGTAAGACCA CGCTGACGGA AAAACTGCTG CTCTTCGGGC GCGCCATTCA ACTTGCCGGG
ACGGTGAAAG GCCGCAAATC GGACCGCCAT GCCACCTCTG ACTGGCTGGA GTTGGAGAAG
CAGCGGGGTA TCTCCGTGAC CTCCTCGGTG ATGCAGTTCC CGCACAAGGA CGCCATTGTC
AACCTGTTGG ATACCCCGGG GCACGCGGAC TTCTCTGAGG ACACCTACCG CACGTTGACC
GCGGTGGACT CGGCCCTGAT GGTCATTGAC GCGGCCAAGG GTGTTGAGGA GCGCACCATC
AAGCTGATGG AGGTCTGCCG GCTGCGCGAT ACGCCGATCA TGACCTTTGT CAACAAGCTA
GACCGTGAAG GGCGCGACCC GATGGAGCTG CTCGATGAGG TGGAGGAGGT GCTCAAGATC
CGCTGCGCGC CGGTGACCTG GCCGCTGGGC ATGGGCAAGC AGTTCCGGGG CGTCTACCAC
CTGCGGGAGC AACGGGTGCA CCTGTATAGC GCCACCCATG GTGGCCGAAT CCAGGCAGGG
GAGGTGATCG AGGGTCTGGA CAACCCCCGC CTGGATGAGC TGTTCGGCTC GGAGGCGGAG
CAATTCCGCG AGGAGTTGGA ACTGATTCGG GAGGCCGGCC ACGACTTTGA TCACGACGCC
TACCTGCGCG GTGAACTGAC GCCGGTCTAT TTCGGTTCCG CCATAAACAA CTTCGGGGTG
CAGGAGCTGC TGGACGATTT CGTCGATTAC GCCCCGGCGC CGCTGCCGCG GCCGGCGCAG
GAGCGGCGGG TGGAGCCCAC CGAGGAAAAG CTCACCGGTT TCGTCTTCAA GATTCAGGCG
AACATGGACC CGCAACACCA TGATCGAGTG GCCTTTATGC GGATCTGCTC GGGCGGCTAC
CGGCCGGGCA TGAAGCTGCA TCACGTGCGC ACCGGCAAGG ACGTGAAGAT CAGCAATGCC
ATCACCTTCA TGGCCTCGGA TCGCGAGCAG GCCGATGAGG CCTGGGCCGG GGACATCATC
GGTCTGCACA ACCACGGCAC CATTCAGATC GGTGACACCT TCACCGAGGG CGAGGCGCTG
AAATTCACCG GGGTGCCCAA CTTCGCCCCC GAGCTCTTCC GCCGGGTGGT GCTCAAGGAC
CCGTTGCGCG CAAAGGCGCT CACCAAGGGG CTGGAACAGC TTTGTGAGGA GGGCGCCTCA
CAGCTCTTCA AGCCGCTGCT GGGCAACGAA CTCATCGTGG GCGCGGTGGG GGTGTTGCAG
TTCGACGTGG TGGCCTACCG GCTGAAGACG GAGTACAAAG TCGACTGCCG CTTCGAGCCG
GTGAACGTGA GTACCGCCCG CTGGGTGCAC TGCGAGGATG AGAAGAAGCT GGCCGAGTTC
AAGCGCCGTA ATGAGGCCAA CCTCGCCATC GACGGCGCCG GCAGCCTCAC CTACCTGGCG
CCCACACGGG TGAACCTCCA GCTGGCCGAG GAGCGCTGGC CGGAGGTGGC GTTCACGGCC
ACCCGCGAGC ACTGA
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| Protein sequence | MSTQDIQRRR TFAIISHPDA GKTTLTEKLL LFGRAIQLAG TVKGRKSDRH ATSDWLELEK
QRGISVTSSV MQFPHKDAIV NLLDTPGHAD FSEDTYRTLT AVDSALMVID AAKGVEERTI
KLMEVCRLRD TPIMTFVNKL DREGRDPMEL LDEVEEVLKI RCAPVTWPLG MGKQFRGVYH
LREQRVHLYS ATHGGRIQAG EVIEGLDNPR LDELFGSEAE QFREELELIR EAGHDFDHDA
YLRGELTPVY FGSAINNFGV QELLDDFVDY APAPLPRPAQ ERRVEPTEEK LTGFVFKIQA
NMDPQHHDRV AFMRICSGGY RPGMKLHHVR TGKDVKISNA ITFMASDREQ ADEAWAGDII
GLHNHGTIQI GDTFTEGEAL KFTGVPNFAP ELFRRVVLKD PLRAKALTKG LEQLCEEGAS
QLFKPLLGNE LIVGAVGVLQ FDVVAYRLKT EYKVDCRFEP VNVSTARWVH CEDEKKLAEF
KRRNEANLAI DGAGSLTYLA PTRVNLQLAE ERWPEVAFTA TREH
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