| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1378 |
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| Symbol | |
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| ID | 4269570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1578389 |
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| End bp | 1580374 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638126134 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_742217 |
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| Protein GI | 114320534 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.842597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCA CCTGGTATAA AGGGCTACTG TGCAGTCTGT TGCTGGCGAT AGGCGCCGTC
ATCGCGGGGC CGGCGCCGGC TGCCGCGGAC GACGAGGCGG AGTATAGGGA GCAGCGCGAA
CGCTTCCAGG AGGCCTGGAA GCGTTTGGTC AGCGGCCGGG AGGTGGACCT GGCGGCGGTG
ACATCCCGGC TGGGTGACTA CCCGCTGGTA CCCTACCTGC ATTACCGCGA TTTGCGTAAT
CGGCTCGACA ACGCCCGGGC GGCGGAGGTA CAGGCGTACC TGGACCGTTA CGATCTCCCG
GTCAACGGCT TCCTGCGCCG GGCCTGGCTC CATCAGCGTG CCGACGCCGG TGACTGGCAG
GGCTTTATTG CCGCCTACGA CCCCGGCCAG ACCGATACCG CCCTCGAATG CCACTATCTC
GAGGCCCAGG CCCGAACCAT CGGCCTGGAC ACCCATTGGC TGGACGAGGC CCGGGCATTA
TGGACCGTGG GCCATTCCCA GCCCGATACC TGTGACCCGG TCTTTGACCG CCTCTACGAG
CGGGGCGTGC TGCGCTCGGA CGACGCCTGG GCGCGGATCG ACAAAGCCAT GGAGAATGGC
GAGCTCGGGC TCGCCCGCTT CATCGCCCGA CGGCTATTGT CGGGCGATGA GCGGGCCCTG
TTCGACGCCT GGGCGCGGCT TCACGAGCAG CCGGAACGGC TGCTCGACGA CCCGACGATC
CCATCGGGCG GCGAACGCGG CCGGACCATC CTCGCCCATG CCCTGACCCG CCTGGGGATC
CGTGACCCCG ACGAGGGTTG GGCGGCGCTG CAGCAGGTGG CGGAGGAGGG CCCCCTGAGC
CAGGAGCGGG TGCATGAGCT GGCCCGGCAT ATCGCGCTGC GCGCCGCCTA CGGCCACCGG
GACTCCGCTG CCGACTACCT GGATCGCTTG CCAGCGGCCG CCGTCGACGA TGAGGTCCGC
CTCTGGCGGG CGCGGGTGGC CTTGGGCCGG GAGGATTGGC GGGGCCTGCA ACGGGCGATC
GCCGATCTCC CCGCCGAGGA AGGGGCGCGG GACACGTGGC GCTACTGGGA TGCGCGGGCG
GACCTCGCCC TGGGACGGCT GCAGGAAGGC CAACAGGCCC TCGCTGAACT TGCCGAACGT
CGCAGCTATT ACGGTTTTCT CGCCGCTGAC CACGGCCTGC ACGACTACCC CCTACCGCGC
CGGGGCACGA GGCAGCCGGC GGCCAGCCTG GCGGCCATTG AGGCGCTGGC CGACCACCCG
GGCCTGAAGC GTGCCCACGA GTTCTTCCGG CTGGGTATGT GGCCGGAGGC GCGCCGGGAG
TGGCGCGAGG CGCTGACCCG GCTCCCGCCC CCGGAGCAGG AGGCGGCTGC CGAGCTGGCC
CACCGCTGGG GGTGGCACGA CCGGGCCATT TTCACCGCCC ACCAGGCCGG GCTGCACGAT
GCGGTCGACC TGCGTTTCCC CACCCCGTTC CGGGATCGGG TCGAGTACCA CGCGCGCGAG
GCCGGCCTCG ACCCCGCCTT TGTCTTCGCC ATCATCCGCA AGGAGAGCGC CTTCATGCAG
GATGCCCGGT CGCACGCCGG CGCCCTGGGC CTGATGCAGG TGATGCCGGC CACCGGGCGC
GCCGTATCCC GGCGCCAGGG GCGGGCCTTG CCGTCCACCT ATAGCCTGCT CGACCCGGAG
GTGAGCCTGA GGGTGGGTAC CGCCTATCTG GCAGAGATGC TGGCGCGTTA TGACGGCAAC
CCGGTGCTGG CGGCGGCGGC TTACAACGCC GGTCCGCGCC ACGTGGACCG CTGGTTCGAG
GCTGCACCGG ACGCCAGTCC CGATGTCTGG GTGGAGCGGA TCACCTTCCG GGAGACCCGC
GGCTACGTCA AGGATGTGCT GGCCTGGACC AGTATCTTCT CCTGGCAACT GGGCCGGGAG
CCGGTACGGG TTGCCAGCAT GATGCGTGGT GGGGCGCTGT TTGCGGAACT CGACGACGAA
GGGTGA
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| Protein sequence | MAATWYKGLL CSLLLAIGAV IAGPAPAAAD DEAEYREQRE RFQEAWKRLV SGREVDLAAV
TSRLGDYPLV PYLHYRDLRN RLDNARAAEV QAYLDRYDLP VNGFLRRAWL HQRADAGDWQ
GFIAAYDPGQ TDTALECHYL EAQARTIGLD THWLDEARAL WTVGHSQPDT CDPVFDRLYE
RGVLRSDDAW ARIDKAMENG ELGLARFIAR RLLSGDERAL FDAWARLHEQ PERLLDDPTI
PSGGERGRTI LAHALTRLGI RDPDEGWAAL QQVAEEGPLS QERVHELARH IALRAAYGHR
DSAADYLDRL PAAAVDDEVR LWRARVALGR EDWRGLQRAI ADLPAEEGAR DTWRYWDARA
DLALGRLQEG QQALAELAER RSYYGFLAAD HGLHDYPLPR RGTRQPAASL AAIEALADHP
GLKRAHEFFR LGMWPEARRE WREALTRLPP PEQEAAAELA HRWGWHDRAI FTAHQAGLHD
AVDLRFPTPF RDRVEYHARE AGLDPAFVFA IIRKESAFMQ DARSHAGALG LMQVMPATGR
AVSRRQGRAL PSTYSLLDPE VSLRVGTAYL AEMLARYDGN PVLAAAAYNA GPRHVDRWFE
AAPDASPDVW VERITFRETR GYVKDVLAWT SIFSWQLGRE PVRVASMMRG GALFAELDDE
G
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