| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1250 |
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| Symbol | |
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| ID | 4269172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | + |
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| Start bp | 1454061 |
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| End bp | 1454819 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638126000 |
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| Product | type IV pilus biogenesis/stability protein PilW |
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| Protein accession | YP_742089 |
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| Protein GI | 114320406 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.901782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCC CGCCGTCGTT CCGGCCGGCG TTGATCCTGT TTTTGGCCGT CGGTGTCGTG
GGCTGCGGCA CCATGGGCCA ATCGGGGTCC GGCGACAGGG ACCGGGCGGT GGAGGTCAAC
ACCCAATTGG GTCTGGGGTA CCTGCAGGAG GGCGAGTACG AGGAGGCCAA CCGGCGCCTG
GAGCGAGCCC TGGATATTGA TCGTCGCTAC GCCCCCGCCC ATGCCGCCAT GGCGCTCCTG
CAGGAACAGC TCGGTCAACC GGAGGAAGCC GGCCGGCATT ACCGGCGGGC GGTCCGGTTG
GACGGGGAAA ATGCCAGCAC CCGCAACAAC TACGGGCGCT TTCTTTGTGA ACAGGGTGAC
CTGGACCGGG CCCTGGATCA GTTCGAGGCG GCACTGGACA ACCCGCTTTA TCGCAACCCC
CACATCCCCC TCGCCAATGC GGGTGTCTGT TTGATGCGGG AGGGGCAGCA CGAGCGGGCC
GAGGACTATT TCCTGCGCAG CCTGCGGGAG AATGCCCGCT TTGCCCCCGC GCTGCTGCGC
ATGGCGCAGT TGCGTTTCCA GGCCGGGGAC CACGAAGGGG CGGAGGAATA CCTGAATCGA
TACCGTGCTG AGGCACAGCA CACGCCGGCG AGCCTGTGGT TGGGGGTCCA GCTGGCCCGT
GCCGTTGGCG ATGCCGATGC CGAGGCCAGT TACGGGCTGA GTCTGCGCAA CCGGTTTCCG
GATTCCCGCG AGGCTCGCCT ATACCGTGAG AGTCGTTGA
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| Protein sequence | MSIPPSFRPA LILFLAVGVV GCGTMGQSGS GDRDRAVEVN TQLGLGYLQE GEYEEANRRL
ERALDIDRRY APAHAAMALL QEQLGQPEEA GRHYRRAVRL DGENASTRNN YGRFLCEQGD
LDRALDQFEA ALDNPLYRNP HIPLANAGVC LMREGQHERA EDYFLRSLRE NARFAPALLR
MAQLRFQAGD HEGAEEYLNR YRAEAQHTPA SLWLGVQLAR AVGDADAEAS YGLSLRNRFP
DSREARLYRE SR
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