| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1229 |
|---|
| Symbol | leuD |
|---|
| ID | 4269760 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1433087 |
|---|
| End bp | 1433743 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638125979 |
|---|
| Product | isopropylmalate isomerase small subunit |
|---|
| Protein accession | YP_742068 |
|---|
| Protein GI | 114320385 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.975059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.103885 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCAT TCATCAAGCA TAAGGGGTTG GTGGCACCGC TGGACCGTGC CAACGTCGAT
ACCGACGCGA TCATACCCAA GCAGTTTCTC AAGTCGATCC GGCGTACCGG GTTTGGCCCC
TTCCTGTTCG ATGAGTGGCG CTATCTGGAT GAAGGCCAAC CCGACATGGA TTGCAGCCAA
CGGCCGGTGA ACCCCGACTT CGTGCTCAAC CAGGCGCGTT ATCAGGGGGC GAGCATCCTG
CTCACCCGGC GCAACTTCGG CTGTGGCTCG TCCCGCGAAC ACGCCCCCTG GGCGTTGAAG
GACTTCGGCT TTCGGGCGAT CATCGCGCCG AGTTTCGCCG ATATCTTCTA CAACAACTGC
TTCAAGAATG GCCTGCTGCC ACTGGTGCTG ACCGAGGCGC AGGTGGACCG GCTGTTCAAG
GAAGTGGAGG CCGCGCCCGG TTACGAGCTG GAGATCGACC TGCCGGAGCA GCAGGTGCGC
ACGCCGGCCG GGGAGGCCTT CGAGTTTGAG ATCGACGGCT TTCGCAAGCA CGCGCTGCTC
GAAGGGTTGG ACGAGATCGG CCTGACCCTG CAGCACGCCG AAGATATCCG TGCCTACGAG
GCCCGTCGCC GCGAGCAGGC GCCGTGGCTG TTCACCGACC TGGAGGAGGG GCGCTGA
|
|---|
| Protein sequence | MEPFIKHKGL VAPLDRANVD TDAIIPKQFL KSIRRTGFGP FLFDEWRYLD EGQPDMDCSQ
RPVNPDFVLN QARYQGASIL LTRRNFGCGS SREHAPWALK DFGFRAIIAP SFADIFYNNC
FKNGLLPLVL TEAQVDRLFK EVEAAPGYEL EIDLPEQQVR TPAGEAFEFE IDGFRKHALL
EGLDEIGLTL QHAEDIRAYE ARRREQAPWL FTDLEEGR
|
|---|
| |