| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_1012 |
|---|
| Symbol | |
|---|
| ID | 4270041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 1151006 |
|---|
| End bp | 1151893 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638125763 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_741855 |
|---|
| Protein GI | 114320172 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCAAC GCATGAATCG CTCACGCGAG AAGAGGCCAG AGGACTGGTC GTCACCCTCC
GTCGCGAAGG AGTCTCCTGG TCCGCGCTTC TCGCTCTTTG ACCAGGAGGA GGCCCTGCTT
GCCCACGCCG AGGAGATGGT GGGGAAGTTG GATCAGGTGG CGGATGGTGT GCGTGCGCTG
GCGGACGCCT ACCGGCAGAG CTACCGCTCG CAGACGCGGT TGTTGCGGAT GAGCGACCGT
ATGCAGCTGG ACCTGCAGCA GGCCAACCAG AAGCTGGAGG CCCAGGCGGA ATCGCTGCGC
ACGCTCAACG AGGCCCTCGA GAAGGAGGTG CAGGCGCGCG AGACCCTGGC CGAGGAATTG
CACCGCCTGG CCATGATGGA TGACCTGACC GGGGTCTATT CCCGCCGCCA GGTGTTGGAG
GTGGGGGAGC GGGAGCTGGC CCGTCGCCGT CGCCAGGGGC TCACGCCGCT CACTCTGCTG
ATGATGGACC TGGACCACTT CAAGCGCATC AACGACAAGT ACGGCCACGC TGCCGGGGAC
ACGGTGCTGG TCGCCTTCTC CGAAGTGTTG CGGCGCAATC TGCGCGAGTC CGACGCCGTC
GGGCGCCTGG GGGGCGAGGA GTTTCTTGCC GTCCTGCCCG ATGTCGACCT GCAGGGCGGC
CTGGCGTTGG CGGAACGGAT CCGGTCCGAG ATCGCCGAGT TGCGTATTCC CTGGCAGGAG
GAGGCGATCC GGCTGACGGT CAGCATCGGG GTGGCGGGGA TCCTGGCGGT GCATGAGTCC
CTGGATGACA CCATCATGCG GGCTGATGAC GCCCTCTATC AGGCCAAGGT GGCCGGGCGT
AACCGGGTGA CGGTGGCCGG CAGCGGGGCT CAAGGGCCGG AGGGTTGA
|
|---|
| Protein sequence | MGQRMNRSRE KRPEDWSSPS VAKESPGPRF SLFDQEEALL AHAEEMVGKL DQVADGVRAL
ADAYRQSYRS QTRLLRMSDR MQLDLQQANQ KLEAQAESLR TLNEALEKEV QARETLAEEL
HRLAMMDDLT GVYSRRQVLE VGERELARRR RQGLTPLTLL MMDLDHFKRI NDKYGHAAGD
TVLVAFSEVL RRNLRESDAV GRLGGEEFLA VLPDVDLQGG LALAERIRSE IAELRIPWQE
EAIRLTVSIG VAGILAVHES LDDTIMRADD ALYQAKVAGR NRVTVAGSGA QGPEG
|
|---|
| |