| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0651 |
|---|
| Symbol | |
|---|
| ID | 4268263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | - |
|---|
| Start bp | 706380 |
|---|
| End bp | 707954 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638125400 |
|---|
| Product | outer membrane efflux protein |
|---|
| Protein accession | YP_741495 |
|---|
| Protein GI | 114319812 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.703393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.0209094 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG ATCGCCACCC GGGCCACCCC GGCCCGCTCG TTGCACCGGC CCGCCCGGGC
GCCCCCGTGA ACCGGCCCCG GCGCCGGTGG GGGCCGTTGC GCACCGGCCT TCTGGCCGTC
CTGGCGGCGC TGCTCGCCAG CGGCGTACAG GCCGAGCCCC TCACCCTGGA GGAGGCGGTC
CTGCGCGCCC TGGAATCCAA CCCCGCACTG CGCTCCGAGC GCCTGGAGCC GGAGATCGCC
GCCACCTTCC AGGAGATCGA GCGGGCGGTC TTCGACCCGG AGCTCTTCGC CGAGCTGAGC
GTGCGCCGCG ACCGGGAGGA CCGCCTGGAT GACCGCCGCG GCGACCGCTT TGCCGTGGAG
AGCGAGCGCG AAAACGTGCG CGCCGGCGTC CGCCAGCAGT TCGCCCCCGG CACCGAGGTG
GAACTGGGCG TCACCCAGGA CCGGCGGCTA AGCGAGAGCG ACGCCCCAGA TGCCCGGGAC
GGCACCGCCC TGCACCGCTC CCGGCTCAAC CTCACCCTCA ACCAGCCCCT GCTGCAGGGC
CGCGGCCGCG ACGTGAACCT CGTGCGCGTC CAGCAGGCCG AGCTCGACAC CCTGCGCTCG
GCGTACGAAC TGCGTGGCTT TACCGAGGCC CTGATCGCCG ACGTGGAGAG CACCTACTGG
GACTTGGTGC AGGCGGAACG CGAGATCGGG TTGTTCGAAG CCTCGCTGGC GCTGGCCGGG
GAACAGATCG AGCGCACACG GGAACGGATC CGGCTGGGGG ACCTGTCGGA GACCGAACTG
GCCCCGCTGG AGGCGGAGGC CGCGCTCCGC CGGCAGGAAT TGATCGACGC CCGCAACCGG
CGCGACCTGG CGCGACTGGA GCTACTGCAA CTGACCGGGA CCGACTACGC CCCGGGCGAG
GCCCCGGAGC TGACCCCGGA GACCGCCCCC GCGCTGCCCG GGGACACCGA GCCGGAGCCG
GTGGCCAACC ACCTGCTGCT CGCCCTGGAG CACCGGGCCG AACTGCGCGA GGCCCGGCTG
CTTCTGGAGC GCAATGAGCT GGAGCTGGTG CGCACCCGCA ACGGCCTGCT GCCGCGGCTG
GATCTTTTCG TCACCCTGGG CAAGAGCGGC TTTGCCGACT CCTTCGGTTC AGCGGTGCAG
GAACTGGACG GCCGCAGCTA TGACGCCGTG GCAGGCCTTC GGGTGGAACA CCCCCTGGGC
CGCCGGGCCG GTCAGGCCGA ACACCGCCAG GCCGGGTTAC AACGGGAACA GGCCCTGCTC
GGCATCGACA ACCTGACCCG CCTAGTGCAG ATGGACGTGC AGGCCGCCTG GCTGGAGGTC
GACCGCAGCC AGGCGCAGAT CGCAGCCACC ATGGCCACCG TTGCCGCCCA GGAGGAGCGC
CTGCGGGCCG AGAGCGCCCG CTTTGAGGTG GGCCAGGCCA CCGCTTTCGC CCTCTCGCAG
GCGCAACGCG ACCTGCTACA GGCCCAGGTG GACCGACAGG CCGCTGAAAT CGGCTACCGC
CAGGCCCTGG TCGAGCTTTA CCGTCTGGAC GGCTCCCTGC TGGAGCGGCG CGGCATTCAG
GCCATGGGGC GCTGA
|
|---|
| Protein sequence | MTQDRHPGHP GPLVAPARPG APVNRPRRRW GPLRTGLLAV LAALLASGVQ AEPLTLEEAV
LRALESNPAL RSERLEPEIA ATFQEIERAV FDPELFAELS VRRDREDRLD DRRGDRFAVE
SERENVRAGV RQQFAPGTEV ELGVTQDRRL SESDAPDARD GTALHRSRLN LTLNQPLLQG
RGRDVNLVRV QQAELDTLRS AYELRGFTEA LIADVESTYW DLVQAEREIG LFEASLALAG
EQIERTRERI RLGDLSETEL APLEAEAALR RQELIDARNR RDLARLELLQ LTGTDYAPGE
APELTPETAP ALPGDTEPEP VANHLLLALE HRAELREARL LLERNELELV RTRNGLLPRL
DLFVTLGKSG FADSFGSAVQ ELDGRSYDAV AGLRVEHPLG RRAGQAEHRQ AGLQREQALL
GIDNLTRLVQ MDVQAAWLEV DRSQAQIAAT MATVAAQEER LRAESARFEV GQATAFALSQ
AQRDLLQAQV DRQAAEIGYR QALVELYRLD GSLLERRGIQ AMGR
|
|---|
| |