Gene Mlg_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlg_0401 
Symbol 
ID4269979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlkalilimnicola ehrlichii MLHE-1 
KingdomBacteria 
Replicon accessionNC_008340 
Strand
Start bp448712 
End bp449251 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content73% 
IMG OID638125131 
Productrare lipoprotein B-like protein 
Protein accessionYP_741245 
Protein GI114319562 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.258768 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.553058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC CGGCAACGCT TGGAATGGCC CTGCTGCTGG CCCTGCTGCT CAGCGCCTGC 
GGCTGGCAAC TGCGCGGCGT TGGCGGCGGT GCCGCCGGTC TTGATGGCAC CGCGGTCTAC
GTGGCCGGCA GCCCGGCGCG GGCGTTGCAG GACGCCGTGG ACGAGGGCCT GTCGGTGAGC
GGCGCGCGGC AGGTGGATAG CGCGGAGGCC GCCGACCTGG TGCTGCGCAT CGTCGGCGAC
GCCCGCGAGC GGCGGACCCT GACCGTGGAC CGCGATATCC GCGCGCGGGA GTACGAACTG
CGTTACCGCC TGACCTTCGA ACTGGACAAC GCCGACGGCG AACACCTGCT GGCACGCAGC
CAGGTCAACG CCGTCCGCGG CTTCCGCGCC GATCGGGACG ACCCGGTGGG CACCGAGGGG
CGTGAGGAGG AGTTGCTCAT CGACCTGCGC CGGGACGCCG TGCGCCTGAT GCTGCTGCAG
GTCGCGGCCC ACCGGGACGC CGAGCCGATC ACCGACGACA ACGCCGCAGC GGCGGACTGA
 
Protein sequence
MNRPATLGMA LLLALLLSAC GWQLRGVGGG AAGLDGTAVY VAGSPARALQ DAVDEGLSVS 
GARQVDSAEA ADLVLRIVGD ARERRTLTVD RDIRAREYEL RYRLTFELDN ADGEHLLARS
QVNAVRGFRA DRDDPVGTEG REEELLIDLR RDAVRLMLLQ VAAHRDAEPI TDDNAAAAD