Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_0249 |
Symbol | |
ID | 4268726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 284503 |
End bp | 285000 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124974 |
Product | fimbrial protein pilin |
Protein accession | YP_741094 |
Protein GI | 114319411 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGGGAG GGCATCCTCC CGCGTCATAC GCGCCCGGCG ACGGGTGGAT AGTTAAAAGT CGACTCTACG GGAGAACGAC CATGCAAAAG CAACAGGGTT TTACTTTGAT CGAGCTGATG ATCGTGGTGG CGATCATCGG TATTTTGGCG GCGATTGCGA TTCCGCAGTA TCAGAATTAT GTTACTCGGT CTCAGGCATC TTCGGCGTTG AGCACGCTCT CTTCTCTGAG GACCTCATTT GAGGAGGCTA TTCAACGAGG AGTGGACCCT TCATTTAATT CAGAGGATGC TGGTTTTATC GGCATGGCAA GTGACGAACC GGACATCGGT ACGCTGTCTT TCAGAGCGGA CGACGGTGGT CTTGATTTTG ACTTTAGTAC TGAGGCCACT GCTGATCTTC AAAACGGAAC ATTGTCACTC GTAAGAACTG CACAAGGTTC TTGGAGCTGC CAGAGCGATG GTATAGAAGA CCGTTTCCTC CCGCGGGGCT GTGACTAA
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Protein sequence | MRGGHPPASY APGDGWIVKS RLYGRTTMQK QQGFTLIELM IVVAIIGILA AIAIPQYQNY VTRSQASSAL STLSSLRTSF EEAIQRGVDP SFNSEDAGFI GMASDEPDIG TLSFRADDGG LDFDFSTEAT ADLQNGTLSL VRTAQGSWSC QSDGIEDRFL PRGCD
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