| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_0143 |
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| Symbol | |
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| ID | 4269274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008340 |
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| Strand | - |
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| Start bp | 165519 |
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| End bp | 166451 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638124867 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_740988 |
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| Protein GI | 114319305 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03006] polysaccharide deactylase family protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.839924 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGACTA GGCAGGGACA AGGCCGCCAG GTCAGCGACA TGCAGGGGGT GGTGAACGCC
CTCACCGTGG ACGTGGAGGA CTACTTCCAG GTCTCGGCGC TGGCGCCGCA CATCCCGCGC
GAGAGCTGGT CGCACCGCGC CTGCCGGGTG GAACGCAATC TCGATCGGAT CCTGGCTCTG
TTCGAGCGCC GGGATGCCCG GGCCACCTTC TTCACCCTGG GCTGGATCGC CGAGCGCTAC
CCGGCGGCGG TGCGCCGCAT CGTCGAGTGC GGCCACGAGC TGGCCAGCCA CGGCTACGGC
CATGAACGGG TCAGTGACCT GGGCCCGGCC CAGTTCCATG CCGACATCAC CCGCGCCAAG
GCCTTGCTGG AGGACATCGG CGGGGTCGCC GTCAAGGGCT ATCGCGCCCC CAGCTTCTCC
ATCGGCCGGA GCAACCTCTG GGCCCTGGAG GTGCTGGCGG AGACCGGGCA CCGCTACAGC
TCCAGCATCT ACCCGGTGCG CCACGACCAC TACGGCATGC CGGAGGCACC GCGCCACCCG
CACCGCCCCA CCGGGCGCGG CGGTATCCTG GAGCTGCCCC CCGCCACCCT GGCACTGGCC
GGGCGCAATC TTCCGGCCGC GGGCGGCGGC TACTTCCGGC TGCTGCCCTA CGCGGCCTCC
CGCGGCGCGC TGAACCGCAT CAACCGCGTC GAGGGCCAGC CGGCGGTCTT CTACTTCCAC
CCTTGGGAGA TCGACCCCGG CCAGCCCCGG ATCCCGGGCA TCGGCCTGAA GACCCGCTTT
CGCCACTACC TCAATCTGCA CCGCATGGAG GCGCGGCTGG AGCGGTTGCT GCACGACTTC
CGCTGGGACC GGATGGACCA GGTCTACGCC AGTGCCCTTG CCGGCGAACC ACAGCAGGCC
ACGCCGCCAG CCGCCGCGCC TGAACTCGCT TGA
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| Protein sequence | MTTRQGQGRQ VSDMQGVVNA LTVDVEDYFQ VSALAPHIPR ESWSHRACRV ERNLDRILAL
FERRDARATF FTLGWIAERY PAAVRRIVEC GHELASHGYG HERVSDLGPA QFHADITRAK
ALLEDIGGVA VKGYRAPSFS IGRSNLWALE VLAETGHRYS SSIYPVRHDH YGMPEAPRHP
HRPTGRGGIL ELPPATLALA GRNLPAAGGG YFRLLPYAAS RGALNRINRV EGQPAVFYFH
PWEIDPGQPR IPGIGLKTRF RHYLNLHRME ARLERLLHDF RWDRMDQVYA SALAGEPQQA
TPPAAAPELA
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