Gene Mlab_1569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1569 
Symbol 
ID4795565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1601605 
End bp1601973 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content45% 
IMG OID640100256 
ProductDNA-directed RNA polymerase, subunit F 
Protein accessionYP_001031000 
Protein GI124486384 
COG category[S] Function unknown 
COG ID[COG1460] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0257686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAA AGAAAATTAT CAGTGAAGAT ATGATGACCC TTCCAGAGCT TCGCGAAGAA 
CTTATTGCGA TCCGCGAAAA TCGTTCCAAT GGAGAAGAGG GTGAAGACAC CGCCAGGAGC
ATATCATACG AACTGCGTAA GAGTATTGAC CATGCAGACA GTCTCAGTAA ATGCAGCGTT
GAAACGGCAA AATCCCTCCT TGCTATCCTC GGATCCATGG AGAAGACGAA ACCGGAAATC
GCCTGCAGGA TCGTAAACAT CATGCCAAAA AGCCGTGATG AGATCCGGGC AATTTACGCA
AAAGAGCGGT TTACTCTTCT TCCCGAAGAT TTAGATCAGA TTCTTGACAC TCTGCATAAA
TTCGAGTGA
 
Protein sequence
MKVKKIISED MMTLPELREE LIAIRENRSN GEEGEDTARS ISYELRKSID HADSLSKCSV 
ETAKSLLAIL GSMEKTKPEI ACRIVNIMPK SRDEIRAIYA KERFTLLPED LDQILDTLHK
FE