Gene Mlab_1486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1486 
Symbol 
ID4796009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1520699 
End bp1521319 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID640100170 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_001030917 
Protein GI124486301 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000112239 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00320062 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCGTA TCGCGGTACT TGCATCCGGA CGCGGGTCCA ACTTCCAGGC GATTCTGGAT 
GCTCTTGCAG CAGGCAAAAT CAACGGAGAG ATTGTGGCTC TTTTGACGGA CAACAGAGAT
GCCTATGCAA TCGAACGTGC AGATGCTGCC GGGATTCCTG CTATTGTTCT CAATTACAAA
GATTATCCCT CCAAAGAGGC GTATGAACGC GATCTTCTTA CTGCTATGCA GGATATTTGT
GCCGATCTTT TTGTTTGTGC CGGATATATG CGTATCATCG GTTCTAAGAT TGCCCGGGAA
TTTTCCGGAA AAATGATAAA TATCCATCCG GCCCTTCTCC CTGCGTTTTC CGGTCTCCAC
GGGCAGCGTC AGGCTCTGGA ATACGGGGTA AAAATCGCCG GCTGCACAGT TCATTTCGTT
GACGAAGGTC TCGATTCCGG CCCGATCATT TTACAGAAAT CTGTCGAGGT TCTGGATGAC
GATGATGAAG ACTCTTTGTC GGAGAGGATC TTAGAACAGG AACACCGGGC ATTTCCCGAA
GCCGTAGCAT TGTTCTGTGC CGATCGCCTG ACGGTTGTCG GCCGTCATGT GAAAATACTT
CCCGAGGCAA ACAATCAATA G
 
Protein sequence
MKRIAVLASG RGSNFQAILD ALAAGKINGE IVALLTDNRD AYAIERADAA GIPAIVLNYK 
DYPSKEAYER DLLTAMQDIC ADLFVCAGYM RIIGSKIARE FSGKMINIHP ALLPAFSGLH
GQRQALEYGV KIAGCTVHFV DEGLDSGPII LQKSVEVLDD DDEDSLSERI LEQEHRAFPE
AVALFCADRL TVVGRHVKIL PEANNQ