Gene Mlab_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1435 
Symbol 
ID4795941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1464282 
End bp1465049 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content50% 
IMG OID640100120 
Producthypothetical protein 
Protein accessionYP_001030867 
Protein GI124486251 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAATC TGACCAGTAC ATCTGTGCCT GCAGACGGGA TAAGCGGATT TTTCCAGAAC 
GCCATAGACT CGTTCGTTTC CCAAATACCC TTCTGGCAGG ATATTCTGCT CCCAGCTCTC
TGGGATGGGT TAGTGGTGAC GATCCAGCTT GTGCTCATGA CGGCACCACT CGGTCTCCTT
CTTGGTCTTC TTGTGGCTGT ATCCAGAGTT TACGGGCCCA CGCCGGTCAA ATGGCTTGCA
AAACTGTATG TCATCTTTTT CCGTGGATGT CCGCTTCTTG TTCTGCTGTT TATTCTGTAC
TTTGGTCTGC CGTCGATCGG GATCGTTCTC GGATCCTATT TCTCTGCTCT TGTCGGGTTT
ATTTTGTGTA ACTCGGCATA TAACTCCGAG TATCTCCGTG GGGGACTCCA GTCGATAAAA
CGCGGTCAGC TGCTTGCGGC CAGATCACTT GGCATGACGA AAGCACAGGG AGTTATGTAT
GTGGTTGTCC CGCAGGCACT TCGCCGTGCT CTTCCGGGTG TTTCAAACGA GTTTATTTAT
CTGATAAAAT ACTCGTCGCT GGCCTATGTG GTTGCGGTAA TCGAACTTAC CGGTGCGGCA
AAAATTATTG CAAGCAAGTA CTTCATGTAC TTCGAGGCAT TTGCGGCAGT AGGAGTTTTC
TATCTGATTC TCGTGACGAT CACAACGATC GGTGTCCACT GGCTTGAGAA GAAGTATGCG
ATCCCCGGCG TCTCGGGCGT TGTTGGAAAA GTCACCAAAG AACACTAA
 
Protein sequence
MDNLTSTSVP ADGISGFFQN AIDSFVSQIP FWQDILLPAL WDGLVVTIQL VLMTAPLGLL 
LGLLVAVSRV YGPTPVKWLA KLYVIFFRGC PLLVLLFILY FGLPSIGIVL GSYFSALVGF
ILCNSAYNSE YLRGGLQSIK RGQLLAARSL GMTKAQGVMY VVVPQALRRA LPGVSNEFIY
LIKYSSLAYV VAVIELTGAA KIIASKYFMY FEAFAAVGVF YLILVTITTI GVHWLEKKYA
IPGVSGVVGK VTKEH