Gene Mlab_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1400 
Symbol 
ID4795768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1429888 
End bp1431000 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content50% 
IMG OID640100085 
Producthypothetical protein 
Protein accessionYP_001030833 
Protein GI124486217 
COG category[R] General function prediction only 
COG ID[COG1163] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTCG AAGAAGATAT TCGTGCAATT GAGGACGAGA TAAAAAATAC CAAATACAAC 
AAAGCTACCT CGCAGCACAT CGGGCGTCTG AAAGCGAAAC TCGCAAAAAT AAAAGACGAC
ATGGTCATGC GGGCAATCAA GTCCGTAGGC GGGGGAGAGG GATTTTCGGT AAAGAAATCC
GGAGACGGGA CAATCGTTCT TGTCGGATTC CCGTCTGTTG GTAAGTCCAC GCTTTTGAAC
AAACTTACCG GCGCGCAGAG TGAAACCGGC TCATATGCGT TCACCACTCT TACCGTCGTT
CCGGGCCTGA TGGAGTACAA AGGCGCAAAG ATCCAGATCC TCGATATTCC CGGACTGATC
GCCGGCGCTG CAATGGGCAA AGGCAGAGGA AAGGAAGTTA TTGCGGTCGT TCGAACCGCC
GACCTTATCG TAATCCTTGG AGATGTATTC AATGCCGTGC ATGTGGACGT GCTGATGCGC
GAACTTTACG ACTCCGGCAT TCGGATCAAC AAACCTAAAC CGGATATCAC CATCAAAAGA
ACCGGTGGAG GAGGTATCAG GCTGAACAGA GTCGGGGCCG TAAAACTTGG ACTTGAAGAG
GTCCGCGCCA TTCTTGGTGA AAATAAAATC ATGAACGCCG ATGTTCTGAT CCGCGGAAGC
AACGTGACGC AGGATGATCT GGTGGATGCG ATGCAGGGAA ACAGGATTTA CATCCCTGCA
TTCATTGCCA TCAACAAAGT CGATCTTATC AGCGATGCCC AGCGCAAAGA GGTCGAGGAA
CATATGCGCG AGAAATACGG CGTCGACCCC ATCATGATCT CAGCTCACAA AGGCTATCAT
ATTGAAGAAC TTCAGGATGC GATCTACGAG CACCTCGGGT TCGTCAGAAT CTACATGAAG
CCATACGGCG AAGAGGCGGA CATGGAAGAG CCGATGATCA TGCGCAAAGG CAGCACGATC
GAGGATATCT GCCACCGGCT CCACCGGGAT TTCGTCGATC AGTTCCGTTA CGCAAAAATC
TGGGGAACCT CAGTCAAACA TGACGCAGCC AAAGTAGGTC TGAAACATGT GGTTGAGGAT
AATGATATCG TAACGGTCGT TACGAAGCTG TAA
 
Protein sequence
MGLEEDIRAI EDEIKNTKYN KATSQHIGRL KAKLAKIKDD MVMRAIKSVG GGEGFSVKKS 
GDGTIVLVGF PSVGKSTLLN KLTGAQSETG SYAFTTLTVV PGLMEYKGAK IQILDIPGLI
AGAAMGKGRG KEVIAVVRTA DLIVILGDVF NAVHVDVLMR ELYDSGIRIN KPKPDITIKR
TGGGGIRLNR VGAVKLGLEE VRAILGENKI MNADVLIRGS NVTQDDLVDA MQGNRIYIPA
FIAINKVDLI SDAQRKEVEE HMREKYGVDP IMISAHKGYH IEELQDAIYE HLGFVRIYMK
PYGEEADMEE PMIMRKGSTI EDICHRLHRD FVDQFRYAKI WGTSVKHDAA KVGLKHVVED
NDIVTVVTKL