Gene Mlab_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1187 
Symbol 
ID4794409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1212568 
End bp1213731 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content56% 
IMG OID640099860 
Producthypothetical protein 
Protein accessionYP_001030623 
Protein GI124486007 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.289256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0319746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCAGG ATATTCGGCC GGTGTTTTCC CGACGGAAAA GCATATATGG CAAACAGGGG 
GGATATGTAC TCCTTAGTAT GCCGGATGCA TTTCTCACCA CCTATCTGAA CGATGCGATC
AAAAAGCTGA TCAAAGATGT TCTGAAGGGA ACGCTTTCGA ACCGGAAGGA GACGGCGTTT
CTTCTCTTTC AGGCACGTCA GCAGCGTGAG AATGCGAAGA GGCGGAGTGC ACACCCGAAT
ATGCCGGTTT TTCTTATCGC AAGCATCACG TCGGCCTGCA ATCTCCATTG TGCGGGCTGC
TATGCCCGGG CCACGGGTAT GTGCGGGGAT GAGAAACCGG CGGGAGCGGA GCCTATGAGC
GTTCCCGAGT GGGAGAATAT TTTTCTGCAG GCAGAGGGGC TTGGGATCTC GTTTATCCTT
CTTGCCGGAG GGGAGCCTCT GCTCCGCCGT GATCTGATCG AGGCGGCGGC AGGGCATTCG
TCGATCATCT TCCCGATTTT TACGAACGGG ACGCTGATCG ATGATGCATA TACGAAGCTT
TTCGATGAGA ACAGAAATCT GGTGCCGGTC ATCAGCATCG AAGGGGGCAT CGAGGAGACG
GATGCCCGCC GGGGGTCGGG GACGTATACG TCGATCCTTG CATCGATGGG CCGCCTTCGG
GAGGGAAAGA TCCTGTTCGG TGTTTCGGTG ACGATCACGA CGGAGAATCT TGCCGAGGTG
ACGTCGGCGG CGTTTCTGGA TCTGCTGCGG GATCAGGGTT GCCGGCTCGT GTTCTATATC
GAGTATACGG CGATCGATCA CGGTTCAAAG GAGATGGAAC TGGACGCGGC GAGGCGTGAG
GAGCTGGAGG GCAAAATGAC GGGGATCAAG TCGGCGTATC CGGGGATGGT GTTTATTTCG
TTCCCGGGGG ACGAGAAGCA TATGGGCGGC TGTCTTGCGG GCGGGAGAGG ATTTTTCCAT
ATCAATCCGT ACGGTTCGGC AGAGCCGTGC CCGTTTTCGC CGTATTCTGA CCGGAATCTC
CGGAACGTTT CTCTGCTGGA TGCGGTGAAC TCGCCGTTTT TTGCGAGGCT GATCGATGCG
GGTCTCGTTG GGGGAGAGCA TGACGGCGGC TGTGCTTTGT TCGAGCACGA GGCGGAAGTC
ATCGCCCTGA TCGATAAGGA GTAA
 
Protein sequence
MIQDIRPVFS RRKSIYGKQG GYVLLSMPDA FLTTYLNDAI KKLIKDVLKG TLSNRKETAF 
LLFQARQQRE NAKRRSAHPN MPVFLIASIT SACNLHCAGC YARATGMCGD EKPAGAEPMS
VPEWENIFLQ AEGLGISFIL LAGGEPLLRR DLIEAAAGHS SIIFPIFTNG TLIDDAYTKL
FDENRNLVPV ISIEGGIEET DARRGSGTYT SILASMGRLR EGKILFGVSV TITTENLAEV
TSAAFLDLLR DQGCRLVFYI EYTAIDHGSK EMELDAARRE ELEGKMTGIK SAYPGMVFIS
FPGDEKHMGG CLAGGRGFFH INPYGSAEPC PFSPYSDRNL RNVSLLDAVN SPFFARLIDA
GLVGGEHDGG CALFEHEAEV IALIDKE