Gene Mlab_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_1164 
SymbolrpoH 
ID4794741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp1185475 
End bp1185723 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content47% 
IMG OID640099836 
ProductDNA-directed RNA polymerase subunit H 
Protein accessionYP_001030600 
Protein GI124485984 
COG category[K] Transcription 
COG ID[COG2012] DNA-directed RNA polymerase, subunit H, RpoH/RPB5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.29622 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAC TCAATGTATT ACTGCATGAG ATGGTCCCCG ACCATCAGAT CATGACTGAC 
GAAGACGTCA AAAATCTTCT CACAACCTTC GACATCACGG AAGATCACCT TCCAAAAATC
TATCATGATG ACCCGGCTGT AAAAGCCTGC GGCGCAAAAC CCGGAAACGT CATTATGATC
GTAAGAAAGA GCCAGACAGC AGGCGAAGCC ACATCCTACC GCCTTGTCGT TAGAAGGCCG
AAAAAATAA
 
Protein sequence
MTRLNVLLHE MVPDHQIMTD EDVKNLLTTF DITEDHLPKI YHDDPAVKAC GAKPGNVIMI 
VRKSQTAGEA TSYRLVVRRP KK