Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0934 |
Symbol | |
ID | 4795593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 931169 |
End bp | 932899 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640099599 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001030372 |
Protein GI | 124485756 |
COG category | [S] Function unknown |
COG ID | [COG3356] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0753636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCG AAGTAAAAAC CGAATCATTG ACCAAATATC TCTTCGATGC ACCGAAATGG GGATTGTCTC TTGGATTGAT AATCCTACTC GGCCTAATCG CCGACGGAGT AGGGTTTCTC TTCACCGGCA AGATCTGGTG GTTTGGATTT GCCTTCTCGA TCCCCGGCGT CGCTGCGCTG ATCCTCACCA AACCATTCGT AAGCGCGACC GCCCGACAGG AGTTCACATG GAACCGGTCC GGCCTTTTGG CACTCGCGTC AGAAGTATTC ATGCTTCTGT GGATGATCAC CGCTCTGTTC CTTGGCGTAG GCTTTGCCTA TGTCTTCGGC GTCGGATTCA TCCTCGCGAT CAGGCTCGTG GTTCTCGCCG CCGTAGCGGA TTACCGGTTC GGGCGGATGT ATGCGCCGGC CGCCATCCAG ACATTCGCGG GAGCGATCGT TGGAGTCTGG TACTTCGGTC CGGGATTCAT CATTCCGGTC GTCGTTTCGA TCGTGGTATT CTCAGTAGGT GTCATCGTAT TTTTACTACT GTTCGATCTG CCGATGAAAC GGACGAGCGG GGTCGGTGCG ATGCACTTCG TCAATGCATT CCTTGCCCAT CTGACGAACG GATCAAACGA CATGGAGGAG TATTTCCATC ACATCAGCGA GTATGTCTCG GTCCCGGAAA CGACGTTCTT CTTCAAGCGT GCCGGCAAAC CGGATGTCTG GTTCGTCATC CCGAACCTGC ACCCGGGTCC GATGGCTGAG ATCGGCGGCA GTAATTTCCC GAAGATCCTG CACGATGTTT TTGCCGACGA TGCGGTCGTA CTCGTTTCCC ACGGATGCGC AAGTCATGAT CTGAACCTGA TCTCCAACCG CGAAACAAAA AGCATAACAA AAGCGATCCG CGAAAGTCTG GATTCGGTCA CGTATACGGG ACTTGCAAGC CGCCCGGTGC GAACGAGTTT TGGCACGGTT TCAATCCTTT CGCAGAGATT CGGCGACTCT CTTCTGATGA TCACGACACG ATCTCCCGAG ATGACGGAGG ATATGGACTA CTCGATCGGC CGGATCGTCA TGGGAGAGAG TAAAGGAAGA TACGAAAATA TCGGATTCGT TGATGCCCAC AACTGTATGA CGGCGGTCAC CAACATCATT TACCCCTCGA CCAAAACCGG AAACGAGTTC ATCTCCGGAG CGGACGAGGC GATGAACAAA ATGCTGGATG CCGAGATGCT GCCGTTCTGT GTTGGAGCGG CACAGGTCAT CCCGCCTTTC GGACGAGGCG AAGGATTCGC CGACATGGGA ATCATTGCGA TGGTGACCGA GGTCGGCGGC GTAAAAACGG CGTATGTCCT GTTTGACGGG AACAATGTTC ACTTGGGCGT CAGAGAGATC CTGCAGAACG CGGTCCTGGG ACTCGGGATT GACGAGGTCG AGATCCTGAC CACCGATTCG CATGTGGTGA ACTCGGTCTC CGGCAGAAAC CCGATCGGTG ATGCAGTTTC ACCAAGCGAA ATCATCCCGT ATGTCGCAGA AGCGGTCTTA AAGGCGGTCG AAGATCTCTC CACGGCATCG GGAGGCGCCG CCACCAACAT GTGCGAGGAG GTAGAAGTGT TCGGTCCCTC AAGGATCGTT CAGCTGACTT CGACGGTAAA CGCCATCGTG ACAAACCTGC TCCCCCTCTC GACACTTCTG CTGACCACGG CATTTCTGCT GATCATGGTC GTCTGCATGA TCGTGCTGTA A
|
Protein sequence | MKREVKTESL TKYLFDAPKW GLSLGLIILL GLIADGVGFL FTGKIWWFGF AFSIPGVAAL ILTKPFVSAT ARQEFTWNRS GLLALASEVF MLLWMITALF LGVGFAYVFG VGFILAIRLV VLAAVADYRF GRMYAPAAIQ TFAGAIVGVW YFGPGFIIPV VVSIVVFSVG VIVFLLLFDL PMKRTSGVGA MHFVNAFLAH LTNGSNDMEE YFHHISEYVS VPETTFFFKR AGKPDVWFVI PNLHPGPMAE IGGSNFPKIL HDVFADDAVV LVSHGCASHD LNLISNRETK SITKAIRESL DSVTYTGLAS RPVRTSFGTV SILSQRFGDS LLMITTRSPE MTEDMDYSIG RIVMGESKGR YENIGFVDAH NCMTAVTNII YPSTKTGNEF ISGADEAMNK MLDAEMLPFC VGAAQVIPPF GRGEGFADMG IIAMVTEVGG VKTAYVLFDG NNVHLGVREI LQNAVLGLGI DEVEILTTDS HVVNSVSGRN PIGDAVSPSE IIPYVAEAVL KAVEDLSTAS GGAATNMCEE VEVFGPSRIV QLTSTVNAIV TNLLPLSTLL LTTAFLLIMV VCMIVL
|
| |