| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0794 |
|---|
| Symbol | |
|---|
| ID | 4795339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 776372 |
|---|
| End bp | 777511 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640099456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030232 |
|---|
| Protein GI | 124485616 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1867] N2,N2-dimethylguanosine tRNA methyltransferase |
|---|
| TIGRFAM ID | [TIGR00308] tRNA(guanine-26,N2-N2) methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.778881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000000911512 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATGCA GGGAGATCAC GGAAGGGAGC ACTACGTTTA CCGCTCCGGT GCAGGATGAA
ACTACGCAGT TTCCACCAGG GTCGGCGCCG GTTTTTTACA ATACCAAAAT GGAGTTCAAC
CGTGATATGA CGGTGCTCTT AACAAAAATC GTTCAGCCGG AGGATTATCT GGACGCGATG
GCGGCGACGG GAGTCCGCGG ACTTAGGATC GCCAACGAGG CAAAGATTCC GGTCACGATC
AATGACCGGG ACGAGCAGGC GGTCAAAATC ATCAAATACA ATGCAGAGAA GCTCGGCGGC
GATATCAGTG TGACCTGCGA TGATGCGAAC CGGCTGATGT GCACGTCCCG GTTCGATTCG
ATCGACCTCG ATCCGTTCGG AACGCCTGTT CCTTTTCTCG ATGCCGCGTC CAGGGCCGCA
AAACATTATC TTTTTGTCAC GGCGACGGAT ACGGCCCCTC TCTGCGGAGC TCATTTCAAA
GCCGGGTGCC GCAGATATTT TGCGACGCCG AGAAACACAG AGTATCACGC AGAAGTGGGC
CTTCGGATGA TGATGGGGAC GATGGCCCGG GAACTCGTGA AATACGACCG CGGCATGAAG
CCGATCCTGA GTTATGCGAA GTCCCACTAC TTCCGCTCGC ATGTCAGGGT TTTAGGCAAA
GTCACGGCCG CCGACGAAAC ACTTGCACAG ATCGGTTTTG TCATGCAGTG CCCAAAGTGT
CTCTACCGGG AAGAACAGAA AGGCTCTCTC TACCCGAAAA TGCATATCTG TCCCCACTGC
GGCGTCGAGA CCGTACCTGT TGGGCCCTTG TGGATGGGAC CTCTGCAGGA AAAGGAGATC
CTTGCCGAAA TGCAGACCGC CCTCGCAGAG CTGCAGTTTG GAACCAAACG GCAGATGGAA
AAAATGCTGA CGTTTCTGCT CGCAGAACCC GAGACCTGCA CGTATTACGA TTATCACATC
ATTTCCCGGA ACATGAAGGT CTCGCCGCCC AATATGGAAG AGCTGATCGC AAGCCTGAAT
GAGGCCGGGT ATTATACGAC CCGAACCCAT TTCTGCGATA CCGGGATAAA AACGACGGCT
CCTCTGCCTC TTATCGAGGA GAAGATCCGT CTCTGGAATG CCAAAAATCT TCAGATGTAG
|
|---|
| Protein sequence | MECREITEGS TTFTAPVQDE TTQFPPGSAP VFYNTKMEFN RDMTVLLTKI VQPEDYLDAM
AATGVRGLRI ANEAKIPVTI NDRDEQAVKI IKYNAEKLGG DISVTCDDAN RLMCTSRFDS
IDLDPFGTPV PFLDAASRAA KHYLFVTATD TAPLCGAHFK AGCRRYFATP RNTEYHAEVG
LRMMMGTMAR ELVKYDRGMK PILSYAKSHY FRSHVRVLGK VTAADETLAQ IGFVMQCPKC
LYREEQKGSL YPKMHICPHC GVETVPVGPL WMGPLQEKEI LAEMQTALAE LQFGTKRQME
KMLTFLLAEP ETCTYYDYHI ISRNMKVSPP NMEELIASLN EAGYYTTRTH FCDTGIKTTA
PLPLIEEKIR LWNAKNLQM
|
|---|
| |