| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0532 |
|---|
| Symbol | |
|---|
| ID | 4795493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 505979 |
|---|
| End bp | 507184 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640099190 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029973 |
|---|
| Protein GI | 124485357 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1836] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00297] conserved hypothetical protein TIGR00297 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.461547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACCC GGATCCGACG TCTCATTTTC GCCCTTGTCG TTACGGCACT GCTGCTTGGA
TGGCCGTATA TTCCCTATTT GGGTCTGGTG GTCCTCGGCT TTGCGGCAGT TCTCTATTTT
GTGGATAAAA GCCGGTATTT TGCGATCGGC GTAGGTGTCC TCGCCGTATT ATATCAAGCC
GGTCTGATAC CCGTGTCGGC CCTGATCGGC CCTCTGATGA TGATCGTCTG GGGAGAATAC
CTGCTTAAGA TTTTCAAAAA CGTCGGTCAT CAGGGAGTTC TTTATACGAT AGGCTCCTCT
GCAGCTCTTT TAGCGACGAT GCTCTACACA AACGAGTATC AGCCGCTTGT GGGCATCATC
GCCGTGATCG TTCTTTTGAT GCTTCGAAGC ATCTTGAAAG ATCGCGAGGA CGGCTCGATG
ATCGGCCTTC TCGGGGTCGC GATGACCATC ACGCTGTTTG AGGATCTGGA GTTCTTCGTC
GATTACCAGA CGCTCGCCTT TGCGGTCGTT TTGTGTGCGG CGTTCGGCTA CTTTGCCTAT
CGGGCAAAGA CGATCGACAT GAGCGGCGTC TTTACGGCGG TGCTGTTCGG CGTGATCCTC
ATCACCTTTG CCGGCGTGAA CTGGTTTTTC ATCGTGATGC TGTTTTTCAT TCTCGGATCA
CTCTTCACCA AGTTCCGGTA TGCGGAAAAG GAGTTTTTAG GAGTGGCCGA GGGTAAGAAA
GGCCGGAGAG GATACATGAA TGCATTCGCG AATGCCGGGG TCGGGGTCGG CGGCGCCGTA
CTGTACGGGA TCACCGGGGA TGTTATTTTC ATCGCCATGT TTATCGGTTC CATTGCGACG
GCGACCGGCG ACACGCTTGC AAGCGAGATC GGCGTGACCG GGGGTACTCC AAGGATGATC
ACGACGCTGC GCCCGGTTCC GCCGGGAACA AACGGCGGAG TTACCGGAAT TGGAGAGCTT
GCCTGCCTTT TTGGGGCGTC CGTCATCTGT CTGCTGGCAT TCATCCTCGG CGTGGCACCG
TGGTATGTCT GCCTGATCGG CGTTGCGGCA GGCTTTATCG GAACGAATCT TGACAGTCTT
TACGGCGCTC TGATCGAAAA CAAGGGTTTT ATCGGGAATT CGGGAACCAA TCTCCTCGCC
ACATTATCGG GCGGGATTTT GGCTCTTCTC ATCTGCCTGG CTTTGGTCAC GGCAGGGCTC
ATCTGA
|
|---|
| Protein sequence | MDTRIRRLIF ALVVTALLLG WPYIPYLGLV VLGFAAVLYF VDKSRYFAIG VGVLAVLYQA
GLIPVSALIG PLMMIVWGEY LLKIFKNVGH QGVLYTIGSS AALLATMLYT NEYQPLVGII
AVIVLLMLRS ILKDREDGSM IGLLGVAMTI TLFEDLEFFV DYQTLAFAVV LCAAFGYFAY
RAKTIDMSGV FTAVLFGVIL ITFAGVNWFF IVMLFFILGS LFTKFRYAEK EFLGVAEGKK
GRRGYMNAFA NAGVGVGGAV LYGITGDVIF IAMFIGSIAT ATGDTLASEI GVTGGTPRMI
TTLRPVPPGT NGGVTGIGEL ACLFGASVIC LLAFILGVAP WYVCLIGVAA GFIGTNLDSL
YGALIENKGF IGNSGTNLLA TLSGGILALL ICLALVTAGL I
|
|---|
| |