Gene Mlab_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0487 
Symbol 
ID4794894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp459801 
End bp460886 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content54% 
IMG OID640099145 
Productsuccinyl-CoA synthetase (ADP-forming) beta subunit 
Protein accessionYP_001029928 
Protein GI124485312 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCC GCGAATATGA AGCAAAACAG ATCTTCCGGG AAGCAGGAAT CCCGGTGCCA 
AACAGTGTTC TGATCACCTC CGCCGACGAG GCAAACGCGG CCCAGAAAAA AGTCGCGGAA
AAGGTTGTCC TCAAAGCTCA GGTCGATGTC GGCGGCAGAG GTAAAGCCGG CGGCATCCTT
CCGGCAAACG CGGAAAACAT CTCAGACGTC GCCCGCGATC TGTTTGCGAA GACCATCAAG
GGACTTCCCG TCGAAAAGAT CCTGGTCGAA GAAGCGCTCG AGATCTCACA CGAATATTAT
CTGAGCATCA CGATTGACCG TGCGAAAAAG ATGCCGCTGA TCCTCTTTTC CAGCGAAGGA
GGAGTTGAGA TCGAGACCCT CGCAAAGGAA AGGCCGGAGG CGCTCCGCCG CGTCTATGTT
GATCCGTCCT TTGTCACGCT CCCGGATTTC ATCGTCCGAA ACGTCATCGG AACGAATCCA
AAAGAGATCG GAACAATTGT CAGGGATCTT TTTGCCGTTT TCAGGTCCAG GGACGCCGTT
CTTGCAGAGA TCAATCCTCT GGTTATGACG CCGAAAGGCA TTCTCGCAGC AGACGGCAAG
ATCATTCTGG ATGACAACTC TCTGATCCGT CAGGGAATCT CCGAGAACAG AGACCTCACA
CCCCGCGAAG CTGAGGCCGA GAAACACGGT TTTTCCTATG TCGAACTGGA AGGAAACATC
GGCGTGATCG GAAACGGCGC GGGTCTAACC ATGGCAACCC TCGATATCAT CTCCCATTAT
CACGGAAAAG CCGCGAACTT CCTGGATGTC GGCGGCGGAG CTGCTTCGGA CCGGGTTATG
TATGCAGTCC AGCTGGTTGC TTCCATGCCC GGCGTCAAAG TGATCGTGGT CAATCTTCTC
GGCGGGATCA CACGCTGCGA CGAGGTTGCC AAAGGAATCA TTGAGGCAGG AGTCCCGCAG
CCGGTGATCG TTCGGATCGC CGGTACAAAC GAGGAGGAAG GCCGAAGACT TCTTCAGGAA
TGCGGATATG TCATGTCTGA CACTATGGAT GCGGCGATTC GTGCCGCAGT GGAGGTAGTA
CAATGA
 
Protein sequence
MKFREYEAKQ IFREAGIPVP NSVLITSADE ANAAQKKVAE KVVLKAQVDV GGRGKAGGIL 
PANAENISDV ARDLFAKTIK GLPVEKILVE EALEISHEYY LSITIDRAKK MPLILFSSEG
GVEIETLAKE RPEALRRVYV DPSFVTLPDF IVRNVIGTNP KEIGTIVRDL FAVFRSRDAV
LAEINPLVMT PKGILAADGK IILDDNSLIR QGISENRDLT PREAEAEKHG FSYVELEGNI
GVIGNGAGLT MATLDIISHY HGKAANFLDV GGGAASDRVM YAVQLVASMP GVKVIVVNLL
GGITRCDEVA KGIIEAGVPQ PVIVRIAGTN EEEGRRLLQE CGYVMSDTMD AAIRAAVEVV
Q