Gene Mlab_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0439 
Symbol 
ID4796163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp423286 
End bp424218 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content58% 
IMG OID640099098 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_001029882 
Protein GI124485266 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCT GGGTCACCGT CTGGGGATAC GGCGCCGAGA TCAAATCGAC CCGCGACTCG 
CTGATCGTGC GGCAGAAAGG CAGTACGACC CAGTATCCTC TGGATGATAT GCGGCATCTT
TTGATCGCCG GCGGCCACTC TCTGCACACC TCGGTCCTGG AACGCCTCGC GGACCGCGGG
ATCGCCGTCT CCTTTTTCAC GGCGCACGGA AAACCCGTCG GCGGGATCTA CGGAAAAGGC
GCCCCGTCTC TTGCGTCTCA GCAGCGGGAT ATCCCAATCC ATAAATTCGC GATGGCCTCG
ATTAGGTCTT CGCTGGATGA ACGTCTGCGG TACATCAACG AGCTTGCCGA GTTCGATCCC
GAAGGTCTCT ACTTCAAAGG GGAGTTTGAC ATCCTCACCG CAGCACGTGA GGAACTGGAG
TATCTGATCA CCCTTCCGGA AATCGGCCGG GCGTTTTCCC TGACGAAGAC GATGTATTAC
GAGATCATCG GCAGGAAACT TCCCAAAGTG CTGGGCTACC GCCGGAGATG CCAGCCGCCG
TTTATGGATC CGGTGAACGT GATGATGTCC CACGGGTATG CGGTTTTGTA TGCGAACTTC
GCTCTTGCCT GCACAGGAGC AGGCCTCGAT CTCTCCCGCG GCGCCCTCTA CGGGGAGATC
GTCTCGGCGC CCGGCGGTCG CGGAGGGTGC GTTCTTGATC TCATGGAGCC TGCGACCGTG
TCGATGGTCG ACCGGGTGAT TATCCAGATG GCGGCGGAAG GCCGTCTTGA CGGAGCATAC
GAGGTCACGA CCCGGTGTCT TTTATCGAAC GAACTCAAAG AGGAGTTCAT GAAACGGCTG
CACGGTTCGA TCAACATCAC GCTGATCGAA GAGAATGTAA ACCGGTATGC CGAGTCCGTC
AAAGACGGCC GGGACATCGT CTTCCATTAC TAA
 
Protein sequence
MIPWVTVWGY GAEIKSTRDS LIVRQKGSTT QYPLDDMRHL LIAGGHSLHT SVLERLADRG 
IAVSFFTAHG KPVGGIYGKG APSLASQQRD IPIHKFAMAS IRSSLDERLR YINELAEFDP
EGLYFKGEFD ILTAAREELE YLITLPEIGR AFSLTKTMYY EIIGRKLPKV LGYRRRCQPP
FMDPVNVMMS HGYAVLYANF ALACTGAGLD LSRGALYGEI VSAPGGRGGC VLDLMEPATV
SMVDRVIIQM AAEGRLDGAY EVTTRCLLSN ELKEEFMKRL HGSINITLIE ENVNRYAESV
KDGRDIVFHY