Gene Mlab_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0417 
Symbol 
ID4794483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp397297 
End bp398394 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content50% 
IMG OID640099070 
ProductDNA topoisomerase VI subunit A 
Protein accessionYP_001029860 
Protein GI124485244 
COG category[L] Replication, recombination and repair 
COG ID[COG1697] DNA topoisomerase VI, subunit A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0014669 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTGACC CAAGTGAAAG AGATACGGCA ACAAAAAAAC GCCTGATGGA AATTGCCAAA 
GTCTGGTATG ATCAAATTGC GGGCGGCGAC GTTCCTTCGA TCACACTGCC TACGAGAACA
AAGTACAACA TCGAGTATGA TGACGAGTCC GAGGTGTGGA AGTACGGCGA TAAAGAGTCC
GTCAGAAATG CAGGCACTGC GAAGTCCGCC ACGCATATGC TCAAGATGGC TTATGTCATC
TGGTTCATCA AAACCCAACT GCAGGAAAAC CGCTCCTCGA CGTTAAGAGA AATGTATTAC
ATCTCTGAGG GCTGGAAACA GGCGAAGTTC GGAGCCCAGA ACGAGAGCAA TTATCTGATT
GAGGATCTGG AGATCATCAC TGCTCTCCAG AGGGAATTTT TCCATATGCG TCCGGAAGAG
GACGGCGCCT CGATCTTCGG TCCGATCCGT GTCCGGGAAA ATACCCGGCG CGGTATGAAA
GAGATTCACT GTCAGGATGA TGTGGGAGAA GCCGGATACA ATATTCCGAA TAATGTGGAG
AATGTCGAGC TTGTCGATCA CGACGCCTCC TGTGTTATCG CGATAGAAAC CGGTGGTATG
TTCTCCCGTC TGCAGGAAAA CGGTTTTGAT GAAGAGTACA ATGCTGTTCT TCTTCACCTG
AAGGGTCAGC CGGCCCGAGC AACGCGGCGC ATGCTGAAAC GCATGAACGA GGAGCTGGGA
ATCCCCGTCG TTGTTTTCAC GGACGGAGAT CCCTGGTCCT ACCGCATTTA TGCATCAGTC
GCCTATGGTT CTATCAAGTC AGCCCACATG TCCGAACTTC TGGCAACGCC TTCTGCCCAG
TTCATCGGGG TAAAACCATC CGATATCCAG CGGTACAATC TGCCTGCCGA TAAACTTACA
GAACAGGATG TTTCTGCGCT GAAGGCGGAA CTCACCGATC CGAGATTTGC AACCGACTTC
TGGAAAAAAG AGATCAATCT TCAGCTGGAG ATGAATCTCA AGTCTGAACA GCAGGCATTT
GCAAGCCGCG GTCTTGATTT CGTTACTAAG GAGTATCTTC CATCGATGCT CTCCGAGATA
GGTGTTTTAA AGCGCTAA
 
Protein sequence
MSDPSERDTA TKKRLMEIAK VWYDQIAGGD VPSITLPTRT KYNIEYDDES EVWKYGDKES 
VRNAGTAKSA THMLKMAYVI WFIKTQLQEN RSSTLREMYY ISEGWKQAKF GAQNESNYLI
EDLEIITALQ REFFHMRPEE DGASIFGPIR VRENTRRGMK EIHCQDDVGE AGYNIPNNVE
NVELVDHDAS CVIAIETGGM FSRLQENGFD EEYNAVLLHL KGQPARATRR MLKRMNEELG
IPVVVFTDGD PWSYRIYASV AYGSIKSAHM SELLATPSAQ FIGVKPSDIQ RYNLPADKLT
EQDVSALKAE LTDPRFATDF WKKEINLQLE MNLKSEQQAF ASRGLDFVTK EYLPSMLSEI
GVLKR