Gene Mlab_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0238 
Symbol 
ID4795597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp222804 
End bp223967 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content49% 
IMG OID640098884 
Productformylmethanofuran dehydrogenase, subunit F 
Protein accessionYP_001029681 
Protein GI124485065 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.66964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGA GCACAATGTA TCCAAAATTC TCCACGAAGA CTGATGGAGA CAACGTCATT 
ATGGAGCAGA AGCTCCTCGC GAAAGTTTCC CACCTCGTGT TGAAAAAGAA TGTATGTACC
GGGTGTGGTA TTTGTTCTGA AGCATGTCCA AAAGAGGCAA TTGTCCTTGG ACTTGTAGGA
GCAGTCCGCC GTGGTGCAGT GACTACCGAA GCACCGATCT CAGTAGATCC GGCAAAGTGT
TCTTACTGTG GTGTGTGTGT TATTTTATGT CCGTTCAATG CTCTTGGATT AGAGATTGAC
GGTGAACCGA GTCTGCCTAT TCTTGAACAG GAAGGTTTCC CGCAGTATGA TATTACTGCT
GAGATCGACG AGTCCAAGTG TAACCGCTGT ACTGTCTGCC ATGAGGTCTG TCCAAACGAT
GCAATCATCC GTGATGTTCC GACCTTTGAA GGTGTGGATG CTGCAGATGG TAAGAAGCGT
CAGGCAGCCC TTACCGGAAA GACAACCTTC GTGGTTGACA AAGAAAAGTG TACCGTCTGT
GGTATCTGTG CGGCACTCTG CCCGGCACTT TCCGTAGACC GTGTTCCATT CAACGCTGAG
ACGGTTAAAT CCCTCGGTGA CATTGTCTGG GATGAAAAAC TCTGTAACGC TTGTCAGGTC
TGTGCCCTTG CATGCCCAAC TGAGGCAATC AAGGTTGACC GCGTTGTTGA GTCCAACAAA
CTTCCAGGCA AAGTAACCAT TGATATTGAC AACTGCTGCA CCTGTGCATG GTGTGAGAAC
ACCTGCCCAA CCGAAGCAGT CACCATCAAG AAGTTCTTCG ATGGAGAAAT CAGCTTCAAC
GCAGAAAAAT GCCCGGCTGG CTGTTCGACC TGTATCGAAG TGTGCCCGTG CAAAGCAATT
TATCTGCCCT CCCCTGCCTC TGCTGTAGGT ATGAAGAAGG AGAAGGAAGC AGTTATCGCT
GTCAGCAAGG AACTCTGTAT TTACTGTGGT GCCTGTGTCA ATGCATGCCC GTCAGAAGAT
GTTATCACTC TTAAGAGAAC CGCGATCAGA GTCAAAGGAC CCGAGACCGA TCTCTTCAAG
AAGATCGCAG ACAAACTCTA CGTCCCCAGA ACCTCCAAAG TACGTGAGGC ATCAGGTCAC
GTTGAAGTAA AAGAACTGGA GTGA
 
Protein sequence
MAMSTMYPKF STKTDGDNVI MEQKLLAKVS HLVLKKNVCT GCGICSEACP KEAIVLGLVG 
AVRRGAVTTE APISVDPAKC SYCGVCVILC PFNALGLEID GEPSLPILEQ EGFPQYDITA
EIDESKCNRC TVCHEVCPND AIIRDVPTFE GVDAADGKKR QAALTGKTTF VVDKEKCTVC
GICAALCPAL SVDRVPFNAE TVKSLGDIVW DEKLCNACQV CALACPTEAI KVDRVVESNK
LPGKVTIDID NCCTCAWCEN TCPTEAVTIK KFFDGEISFN AEKCPAGCST CIEVCPCKAI
YLPSPASAVG MKKEKEAVIA VSKELCIYCG ACVNACPSED VITLKRTAIR VKGPETDLFK
KIADKLYVPR TSKVREASGH VEVKELE