Gene Mlab_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0171 
Symbol 
ID4795846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp156798 
End bp157799 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content45% 
IMG OID640098817 
Producthypothetical protein 
Protein accessionYP_001029614 
Protein GI124484998 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTGT CTGATTACCC ATATCTGAAA AAAATTGGAA AAAACATCAT TATATTCATA 
ATAACGATGT TTGTACTTTC CATAATCGTC TTTGTCATGG CACGTTTGGC TCCGGGAGAC
CCTTTGCAGG CATTTTACGG CGATGCGCTG GATACCATGA GCATCGAAGA AATGGATGCA
GCACGCGTAA GATTGGGTCT GGACGGGCCC ATATATTATC AGTATATCAA ATGGCTGCTC
CTCGCCCTTG GAGGGGACTT CGGTCTGTCG CTCCAGTATA AAATGCCGGC GATGGACGTC
ATTGCACCCC TTATCAGCAA CACCATTATA CTCGGACTCA CTGCATACAT TCTCGTTTTT
GCCCTCGCAA TTGTACTCGC CGTCATCTGT GCAAAACACG AAGATACCCT GCTTGACAAA
CTAATCTGCA AAATCGGGAC AATGAGCTAT TTTATACCTG CCTTCTGGCT GGGTCTCATC
CTCATCCTCA TATTCAGTGT CAACCTCAAC TGGTTCCCAA GCAGCGGAGC ATACGATTAT
GGTCAGGCGG GTAACATCGC AAACAGAATC TGGCACATGA TACTACCGCT CACCGTGATG
ATATTCTCCC ATATCTGGTA TTATGCATAC ATGATACGCA ACAAGCTGCT GGATGAAAAC
AGAAAAGACT ACGTCCTGCT TGCAAAAATC AAAGGTTTGA CGAAATCCGA GATCCTCTGG
AAACATTCTC TCAGAAACAT CGCACCGACA ATTGTGAATC TCATGGCGAT CTCGATTCCG
CATGTATTAG GCGGGACCGT GATCGCAGAA GCGGTATTTA ACTACCCGGG AATAGGAAAC
ATGGCAATAA GCGCTGCAAA ATATCACGAC TATAATCTCC TCATGCTTCT TGTTCTCATC
ACGGGATCAA TGGTGATCAT AACAAGTATG TGTGCATATA TGATCAACGA AGTCATAGAT
CCCCGTATGA AAGACGCAGG AGGTACAATA TGGGAGAAAT AG
 
Protein sequence
MNLSDYPYLK KIGKNIIIFI ITMFVLSIIV FVMARLAPGD PLQAFYGDAL DTMSIEEMDA 
ARVRLGLDGP IYYQYIKWLL LALGGDFGLS LQYKMPAMDV IAPLISNTII LGLTAYILVF
ALAIVLAVIC AKHEDTLLDK LICKIGTMSY FIPAFWLGLI LILIFSVNLN WFPSSGAYDY
GQAGNIANRI WHMILPLTVM IFSHIWYYAY MIRNKLLDEN RKDYVLLAKI KGLTKSEILW
KHSLRNIAPT IVNLMAISIP HVLGGTVIAE AVFNYPGIGN MAISAAKYHD YNLLMLLVLI
TGSMVIITSM CAYMINEVID PRMKDAGGTI WEK