Gene Mlab_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0058 
Symbol 
ID4796061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp59341 
End bp59886 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content53% 
IMG OID640098703 
Producthypothetical protein 
Protein accessionYP_001029503 
Protein GI124484887 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.504217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00355789 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAGGA TCGTCGTCGG GGTGACCGGA GCATCCGGGA TACTGTATGC AAAACGGTTA 
CTTGAGGCGC TCAAACAGAC AAAAGCCGAA GTTTTTCTCA TCATCTCGGA TACCGCACGG
ACCGTCGCCA AACTCGAAGA GGTCGATCTC TCCGGCTACC CGGTACATTA TGAAGAGAAT
TTCGATCTGG AAGCGGGAAT CGCCAGCGGA TCGTTTCAGT TTGATGCAAT GGTGATCGTT
CCCTGCAGTA TGAAAAGCCT TGCCCAGATT GCAAATGGAT ACTCGACCAC ATTGATCGCG
AGAGCCGCCG ATGTCTGTCT CAAAGAAAGA AGACCGCTCA TTCTCGTCCC TCGGGAGACG
CCGTATTCGC GGGTTCATCT CGTCAACATG CTCGCGGCCC ACGATGCCGG AGCCCTGATC
CTGCCTGCGT CCCCGCCGCT GTATACCCAT CCGAATACTC TGGACGAGCT TGCAGATATG
ATCGCCGCAC GGATTCTTGA TCACTTCGGG ATCGAACATA CCATTGGAAC TCGGTGGAAA
GAATGA
 
Protein sequence
MKRIVVGVTG ASGILYAKRL LEALKQTKAE VFLIISDTAR TVAKLEEVDL SGYPVHYEEN 
FDLEAGIASG SFQFDAMVIV PCSMKSLAQI ANGYSTTLIA RAADVCLKER RPLILVPRET
PYSRVHLVNM LAAHDAGALI LPASPPLYTH PNTLDELADM IAARILDHFG IEHTIGTRWK
E