Gene Mkms_5428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5428 
Symbol 
ID4613112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5661016 
End bp5661810 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content68% 
IMG OID639795123 
Productshort chain dehydrogenase 
Protein accessionYP_941404 
Protein GI119871452 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.819965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC CGATCGTCGC TCCAGAAGTA CCCACCGCAC CCATCCTGGA CCTCGCCGGC 
AAGACCGCCG TCATCACCGG CGGCAGCAAG GGCATCGGCG CGGCCACCGT GGCCCGGTTC
GTCAAAGGGG GAGCTCGCGT CGTCACCTCC GGTCGCGCAC AACCGAAGTC ACTGCCCTCG
GGGGTGGAGT ACGTGGTTGC CGACGTGAGC ACTGTCGACG GTGTCGACCA ATTGGCTCGA
CGTGCCCGGG ATGTCCTCGG CGACATCGAC ATCATCGTCA ACAACGCCGG AGCGTCGACA
CCGCATCTCG GCGGCGTCCT CGACATCGAC GACGCCGAGT GGGTCAAAGA TCTCCACATC
AACTTCCTGG CCGCCGTCCG GCTCAATGCC GCACTACTAC CCGCGCTGTA CGCCCGCGGC
AAGGGCTCGA TCATCAATGT GTCTTCGGCC GCGACGCTGA GTCCGCCCTC GACGATGCTG
CACTACGCCA GCGCCAAAGC GGCCCTGGCC ACGTACACCA CAGGCCTTGC CGCCGAGGCC
GGGCCGCGCG GAGTGCGGGT CAACACCATC ACCCCCGGAA ACGTCGCCTC ACCGGGTGCG
GATGCCATTC GACGAGCGCT CACCGAGGCC GGGGACGTCG ACAGCCCAGC GGCCGGTGGC
ATGCCGATCC CGCTCGGCCG GAAGGGCGAA GCGTCCGACA TCGCCGAGGC CATCGCATTT
CTCGCCTCCG ACCGGGCGGC GTGGATCACC GCGAGCGACC TCCTCGTCGA TGGCGGCCAG
ATGCAGACCA GATAG
 
Protein sequence
MSTPIVAPEV PTAPILDLAG KTAVITGGSK GIGAATVARF VKGGARVVTS GRAQPKSLPS 
GVEYVVADVS TVDGVDQLAR RARDVLGDID IIVNNAGAST PHLGGVLDID DAEWVKDLHI
NFLAAVRLNA ALLPALYARG KGSIINVSSA ATLSPPSTML HYASAKAALA TYTTGLAAEA
GPRGVRVNTI TPGNVASPGA DAIRRALTEA GDVDSPAAGG MPIPLGRKGE ASDIAEAIAF
LASDRAAWIT ASDLLVDGGQ MQTR