| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5359 |
|---|
| Symbol | |
|---|
| ID | 4613043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 5595072 |
|---|
| End bp | 5596154 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639795054 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_941335 |
|---|
| Protein GI | 119871383 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGGG TGGGTAGATG GTGGCGACAG CCCGACCATT TCGATTGGCT CAGCGGTTAT
CTGCAGACCC GCGGAATGGC CACCGCGATG CGCCGAGGGC TGGCGCTGGT CGCCGCATCC
TTGGCGTTGG TGCCGGTCAA CGCGCTGTGG GGGCCTGCCT CCATCGACGA CCGGTTGGCG
GTGAGTCTCG CCCTGGTGGC TTCGCTGGCG GGGCTGAGCC TGGCGGTGCT GTGGCTCAAG
CGCTGGCCCA CCAGAACGGA GTCGGTGCTG TTCGCCGCAA TCGGCAGCGC AACCATCGCC
GGCGGCTGCC TCTGGCAGGC GGAGCCCCTG ATCGGCCTGA CGTTCTGCAC CGCGCTCGCG
GTGTCCGGCG GGTACATCGC GTTCTTCCAC ACGGCCAGGT ACATGCTGAT GAACTTCGTG
CTGGCGGTGG GGGTGGGCGC CTGGCAGGCG ATCCGGGTGG CCGCCGAGGG TGAACCCGTG
CTGGCCCTCA CCGGCTACTT CCTGGTGCTC GAACTGAACA TCGGTGTGCC GTTCGCCATC
CAGGTCGTGG TGCGCTCGCT CGGTACCGAC CTGCTGCAAT CCGACCGCGA TCCGCTCACC
GGACTCCTCA ACCGGCGGGC GTTCACCCAC GCCGTGGTCG GACGGCTGGT GGCTCGCGCC
GACCGGGCCC ACCTGGCGGT GGCGTTGATC GACCTCGACC GGTTCAAGGC GATCAACGAT
CGGCACGGCC ACGCCAGCGG GGACGCCGCC CTGGTCGACG TCGCCGGGGC GTTGACGGCC
GCGGTCACCG AGACCGCGCT GGTGTGCCGT ATGGGTGGCG AGGAGTTCCT GATCGCCGAC
ATCGTGGCGT CGGCCGCGCC GACGGAGTGG GCCCAGGGGC TGTGCGCGGC GGTGACGTCG
ACACCGTTCC GGCTCACGGC CAGCGTCGGC ATCGCCACGG TCCCGCTGCG CGACGTCAAA
CCGGAGCAGG CCGACGAGAC GTTCCGCCGA TTGGTCACCG AGGCCGACGC CGCCATGTAC
GCCGCCAAGC GGCGCGGCGG CAACCAGATC CAGCACGCCG GGGACGCCCG AACCCCTAGG
TGA
|
|---|
| Protein sequence | MQWVGRWWRQ PDHFDWLSGY LQTRGMATAM RRGLALVAAS LALVPVNALW GPASIDDRLA
VSLALVASLA GLSLAVLWLK RWPTRTESVL FAAIGSATIA GGCLWQAEPL IGLTFCTALA
VSGGYIAFFH TARYMLMNFV LAVGVGAWQA IRVAAEGEPV LALTGYFLVL ELNIGVPFAI
QVVVRSLGTD LLQSDRDPLT GLLNRRAFTH AVVGRLVARA DRAHLAVALI DLDRFKAIND
RHGHASGDAA LVDVAGALTA AVTETALVCR MGGEEFLIAD IVASAAPTEW AQGLCAAVTS
TPFRLTASVG IATVPLRDVK PEQADETFRR LVTEADAAMY AAKRRGGNQI QHAGDARTPR
|
|---|
| |