Gene Mkms_5319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5319 
Symbol 
ID4613003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5555175 
End bp5555975 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID639795016 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_941297 
Protein GI119871345 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.64422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCTGG CGACGGCGCG GATCGTCGGC GGCGACCATA CGGTGGTGCT CTGCGACGTC 
CGCACGGAGC GCCTCGACGC CGCCGTCGCG ACGCTGCACG ACCTCGGGAT CACGCCCACG
GCGGTCCACT GCGATGTGAC CGAGCGCGAT GCCGTCGAGG CGTTGTTCGA CACCGCGGCG
AGCCTGGGGC CGATCGTCTC GGTCATCCAC ACCGCCGGGG TCAGCCCCAG CATGGGCGAC
GCGGAATACG TCATGCGCAC CAATGCGATC GGCACGGTCA ACGTCAACGA GGTCTTCTCC
AGCAGGGCAG GCGAAGGCGC AGCGATCGTC AACCTGGCCT CGATGGCGGC ACACCTGCTG
CCCGAGGAGA TCGTCCCGAC CGGACAGTTC CCCCGCGCCC TCGACGACCA GGACGCGTTC
ATGGCCGACA TGCTGGCGGC CTGCGCAGTG GTCCCCGAGG AGGCGCAGTC CGGTTACGCC
TACGCGCTGA GCAAGAACTT CGTCAAGTGG TACAGCAGCG CGCAGGCCGA GCGGTTCAAC
GCCCGCGGGC TGCGCATCGT CTCGGTGTCA CCGGGTTCGA TCGACACCGA GATGGGCCGG
TTGGAGGAAC AGGCCGGCGC CGGGGCGATG GTCGCCGACG CCGCGGTGCC GCGATGGGGC
AAACCGGAGG AGATGGCCGA ACTGCTGGCC TTCTGCGCCG GTGACCGGGC CGGCTACCTC
ACCGGCACCG ACATCCTCAA CGACGGCGGA GTTGTCGCCT CGATGCGGGA ACGCGCCCGG
GTCGCCGCCG ACAATGCCTG A
 
Protein sequence
MGLATARIVG GDHTVVLCDV RTERLDAAVA TLHDLGITPT AVHCDVTERD AVEALFDTAA 
SLGPIVSVIH TAGVSPSMGD AEYVMRTNAI GTVNVNEVFS SRAGEGAAIV NLASMAAHLL
PEEIVPTGQF PRALDDQDAF MADMLAACAV VPEEAQSGYA YALSKNFVKW YSSAQAERFN
ARGLRIVSVS PGSIDTEMGR LEEQAGAGAM VADAAVPRWG KPEEMAELLA FCAGDRAGYL
TGTDILNDGG VVASMRERAR VAADNA