Gene Mkms_5300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5300 
Symbol 
ID4612983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5536993 
End bp5538039 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content71% 
IMG OID639794996 
Productshort chain dehydrogenase 
Protein accessionYP_941278 
Protein GI119871326 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGCTG CGCGCGGTGT CTGCGGTGTT GCCGCGCCGG GCGCCCAAGA AGTCGGTGTG 
GGTGCCCGCC GCGCCGTCCT ACCTGAGTCA TCAGCTCAGA ATCCGCTGAC GGTGATCGAC
GATGCGGTGC GGTTGGCCGG TCGGACCGCG ATCCGGTTGG CCCGCGGGAT CCCCGTGGTC
GGCAACCGGT TCGGCGCACC CCCGCATCTG GACCTGGACG GCCGGGTCGT GTTCGTCACC
GGCGCGGCAC GCGGGCTCGG CGCGCAGATC GCCCGCCAGG CGCACGCGCG CGGCGCTCAG
GTGGTGCTCG TCGGGCGCAC CCTGAAACCG CTGGAGGATC TCGCCGCCGA ACTCGGCGAC
GGGGCGGCCG CCTTCGAGGC CGACGTCACC GACGCCCCGG CTTTGCGACG CGCCGCCGAG
GGTGCGGTCG CCGCGTTCGG CGGGATCGAC GTCGTGGTGG CCAACGCCGG GATCGCGCCG
CCGTCGGAGA CGGTCGCCAC CATCGACCCG GACGAGTTCG AGCACACCGT CGAGGTCGAC
CTGCTCGGCC AGTGGCGCAC CGTACGCGCG ACGCTGCCCG CCGTGATCGC GGCCCGCGGA
CACATCGCGT TCGTCGGCTC GATCTACGCA TTCTTCAACG GTGTGCTCGC CGCCCCCTAC
GCGGTCAGTA AGGCCGGGGT GGAACAGCTT TCGCGTGCCC TGCGGGTGGA GCTGGCGCAG
CACGGTGTCA CCGCGGGCAT CGCCTACCTC GGTTTCATCG ACACCGATCT GACCAGCGAT
GCCTTCGCCG ACGAACACGC CGCCGCGATC CGTTCGGCGG CGCCCGGTTT CATCACCCGG
CCGATGAGTG CCGAATCGGC CGCCGCCGCC GTGCTCTCGG GTGTCGAACG CCGTGCCGCG
CAGGTCACCG CACCCGCGTG GGTGGGTCCG GTGCTGGCGG CGCGCAGCCT CACCACCGCC
GTGATGGACG ACGTCCTGAT GCACAACCCG CGAGTCAGCG ATGCGGTACT CAGCGCCGAA
GACGATGTGG CGCAGAGAGA TTCATAA
 
Protein sequence
MAAARGVCGV AAPGAQEVGV GARRAVLPES SAQNPLTVID DAVRLAGRTA IRLARGIPVV 
GNRFGAPPHL DLDGRVVFVT GAARGLGAQI ARQAHARGAQ VVLVGRTLKP LEDLAAELGD
GAAAFEADVT DAPALRRAAE GAVAAFGGID VVVANAGIAP PSETVATIDP DEFEHTVEVD
LLGQWRTVRA TLPAVIAARG HIAFVGSIYA FFNGVLAAPY AVSKAGVEQL SRALRVELAQ
HGVTAGIAYL GFIDTDLTSD AFADEHAAAI RSAAPGFITR PMSAESAAAA VLSGVERRAA
QVTAPAWVGP VLAARSLTTA VMDDVLMHNP RVSDAVLSAE DDVAQRDS