Gene Mkms_5053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5053 
Symbol 
ID4612733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5292873 
End bp5293541 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID639794747 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_941032 
Protein GI119871080 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGTACC TGCTGACCCA CCTCGACGAC CTGTGGGCGC TCACGGTGAT CCACCTGCGG 
CTGTCGCTGA TCCCGATCGT GCTCGGGCTG CTGATCGCGG TGCCGCTCGG GGCGCTGGTG
CAGCGCACCA CCGCGCTGCG ACGGTTGACC ACCATCACCG CCAGCATCAT CTTCACGATC
CCGTCGCTCG CGCTGTTCGT GGTGCTGCCG CTGATCATCC CGACGCGCAT CCTCGACGAG
GCCAACGTGA TCGTGGCGCT GACGCTCTAC ACCGTCGCCC TGCTGGTGCG TGCCGTACCG
GAGGCGCTGG ACGCGGTCTC GCCCGCAGTG CTCGACGCGG CCACCGCCGT CGGCTACAAA
CCGCTCACCC GGATGCTGAA AATCGAACTC CCGCTTGCCG TTCCGGTACT CATCGCCAGC
CTGCGCGTCG TCGCGGTCAC CAACATCTCG ATGGTGTCGG TCGGCTCGGT CATCGGGGTC
GGCGGGCTCG GCACCTGGTT CACCGAGGGC TATCAGGCCA ACAAGAGCGA TCAGATCGTG
GCGGGCATCA TCGCGATCTT CGTGCTGGCG GTGGTGATCG ACACCCTGAT CATGCTGATC
GGCAAAGCCC TGACCCCCTG GGCCAGGGCC ACCCGCCCGG CCCGGCAGAA GGCGGGGGCG
GCCGCGTGA
 
Protein sequence
MRYLLTHLDD LWALTVIHLR LSLIPIVLGL LIAVPLGALV QRTTALRRLT TITASIIFTI 
PSLALFVVLP LIIPTRILDE ANVIVALTLY TVALLVRAVP EALDAVSPAV LDAATAVGYK
PLTRMLKIEL PLAVPVLIAS LRVVAVTNIS MVSVGSVIGV GGLGTWFTEG YQANKSDQIV
AGIIAIFVLA VVIDTLIMLI GKALTPWARA TRPARQKAGA AA