Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_4890 |
Symbol | |
ID | 4615850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 5125595 |
End bp | 5126383 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639794582 |
Product | type II secretion system protein |
Protein accession | YP_940870 |
Protein GI | 119870918 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.830749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.078643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCG CCGCCGTCGC GCTCGCGTTG GCGCTGCTGC TCAACCCCGT CGACGTGAGT CGGCGGTTGC ACACCCCTGC GCCGCGGCAG GCGCGCCGCG GACTGGTCCA CGCGCTGACC GTGCCGGGCG CCCTGTCGGC GATCGTGCTG TGGTCGGTGA CATCCGTCGG TGTGGTGCTG GCCGCTGCGG TGGCCGGCGC CACCGTAGCG GTACGGATCC GCAACCGGCG CAGAAGGATA CGGCGTGACC GCGAGGCGGA GTCGTTGCAG TCTGCGCTCG AGGTCCTGGT GGGCGAACTC CGCGTGGGCG CACACCCGGT CGCCGCGTTC GAGACCGCCG CCGGCGAGAT CGACGGACAG GTGTCGGATT CCCTGCGGGC CGTCGCGGCG CGCGCCCGAC TCGGCGCCGA TGTCGCGGCG GGTCTGCACG ACACCGGGAG GAAGTCTTCG CTCGCCTCGC AGTGGGACCG CATCGCGGTG TGCTGGCAGC TGGCCCAGAC CCACGGCCTG TCCATCGCCG CGCTGATGCA GACCGCGCAA CGTGATATCG CCGAACGACA ACGCTTTTCG TCGCGGGCGA GCGCCGGGAT GGCCGGGGCG CGGGCGACCG CCGCGGTGCT GGCGGGGCTG CCCGTCCTCG GCATCTGCCT CGGTCAGATG ATCGGGGCCG ACCCGGTGCG CCTCCTGCTG GGCGGCGGGG CGGGTGCCTG GCTGCTGCTG ATCGGTGTGA CGCTGTCCTG CGCGGGCCTG CTGTGGTCGG ACCGCATCAC CGCGGGTGTG ACGACGTGA
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Protein sequence | MSVAAVALAL ALLLNPVDVS RRLHTPAPRQ ARRGLVHALT VPGALSAIVL WSVTSVGVVL AAAVAGATVA VRIRNRRRRI RRDREAESLQ SALEVLVGEL RVGAHPVAAF ETAAGEIDGQ VSDSLRAVAA RARLGADVAA GLHDTGRKSS LASQWDRIAV CWQLAQTHGL SIAALMQTAQ RDIAERQRFS SRASAGMAGA RATAAVLAGL PVLGICLGQM IGADPVRLLL GGGAGAWLLL IGVTLSCAGL LWSDRITAGV TT
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