| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_4394 |
|---|
| Symbol | |
|---|
| ID | 4612337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 4616178 |
|---|
| End bp | 4617347 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639794080 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_940375 |
|---|
| Protein GI | 119870423 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.571141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAT TCGTGGAGAC CGACGAACAA CAGGCGCTGC GGCAGGCGGT GGCGGCGATG
GCCGCCAACT ACGGGCAGGA CTACTACCTC GAGAAGGCCC GCGCCGGTGA GCACACCGAC
GAACTGTGGG CCGAGGCGGG CAAGCTCGGG TTCATCGGGG TCAACCTGCC CGAGGAGTAC
GGCGGCGGCG GCGCAGGCAT GTACGAACTG TCGCTGGTGA TGGAGGAGAT GGCGGCCGCC
GGGTCGGCGC TGCTGATGAT GGTGGTCTCC CCCGCCATCA ACGGCACGAT CATCAGCAAG
TTCGGCACCG ACGAGCAGAA GCGGCGGTGG CTGCCCGGCA TCGCGGACGG GTCGATCACC
ATGGCGTTCG CGATCACCGA ACCCGACGCC GGGTCGAATT CGCACAAGAT CACCACCACC
GCCCGCCGCG ACGGTGGCGA CTGGATCCTC AACGGCCAGA AGGTCTACAT CTCCGGCGTC
GACCAGGCGC AGGCGGTGCT CGTCGTGGGC CGCACTTACA GGGAGGGAGT GGCAAAGGCG
GAGTCGCTAC GACCCGCGCT GTTCGTCGTG CCCACCGATA CCCCGGGGCT GACGTGGACC
AAGATCGAGA TGGAGCTCAT CAGCCCGGAG AACCAGTTCC AGGTGTTCCT CGACGACGTC
CGCCTGCCCG CCGATGCGCT CGTCGGCTCC GAGGACGCCG CGATCGCGCA ACTGTTCGCG
GGGCTGAACC CGGAGCGGAT CATGGGTGCG GCCAGCGCGG TGGGCATGGG CCGCTTCGCG
CTGGGCCGCG CGGTCGACTA CGTGAAGACC CGACAGGTGT GGAAGACGCC GATCGGCGCC
CATCAGGGTC TGTCACATCC GCTGGCGCAG AACCATATCG AGATCGAACT GGCCAAGCTG
ATGATGCAGA AGGCCGCCGC GCTCTACGAC GGCGGCGACG ACGCCGGGGC GGCCGAGGCC
GCGAACATGG CGAAGTACGC GGCCGGTGAG GCGTCGGTGC GCGCGGTCGA TCAGGCCGTG
CAGTCGATGG GTGGCAACGG GTTGACCAAG GAGTACGGCG TCGCGGCGGC GGTGACCGCG
TCCCGGCTCG CGCGCATCGC TCCGGTGAGC CGCGAGATGA TCCTCAACTT CGTCGCGCAG
ACCTCGCTCG GCCTGCCCCG CTCGTACTGA
|
|---|
| Protein sequence | MTGFVETDEQ QALRQAVAAM AANYGQDYYL EKARAGEHTD ELWAEAGKLG FIGVNLPEEY
GGGGAGMYEL SLVMEEMAAA GSALLMMVVS PAINGTIISK FGTDEQKRRW LPGIADGSIT
MAFAITEPDA GSNSHKITTT ARRDGGDWIL NGQKVYISGV DQAQAVLVVG RTYREGVAKA
ESLRPALFVV PTDTPGLTWT KIEMELISPE NQFQVFLDDV RLPADALVGS EDAAIAQLFA
GLNPERIMGA ASAVGMGRFA LGRAVDYVKT RQVWKTPIGA HQGLSHPLAQ NHIEIELAKL
MMQKAAALYD GGDDAGAAEA ANMAKYAAGE ASVRAVDQAV QSMGGNGLTK EYGVAAAVTA
SRLARIAPVS REMILNFVAQ TSLGLPRSY
|
|---|
| |