Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_4086 |
Symbol | |
ID | 4612026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 4312538 |
End bp | 4313638 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639793770 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_940068 |
Protein GI | 119870116 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.875683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCCAT CATCGGCTCT TCGCGCAAGC GGCTCATCGC TGGATCTCCG TGGTGACCCG GTCGAGCTGA CGGCCGCACT CGTCGACATC CCCAGCGAGT CGCGCCACGA GCAGCGCATC GCCGACGAGA TCGAGGCCGC ACTGCGCGAA CAGACAGACG GTTTCGAGAT CATCCGCAAC GGCGACGCGG TGCTGGCCCG CACCAACCGG GGGCTCCCGT CACGCGTGCT GCTGGCCGGG CACATCGACA CCGTGCCCGC CGCCGACAAC GTCCCCAGCC GCCGGGTCGG TGACGAGCTG CACGGCTGCG GCACCTCCGA CATGAAGTCC GGGGACGCGG TGTTCCTGCA CCTCGCCGCC ACTGTCGCCG ACCCCGCACA CGACCTCACG CTGGTGATGT ACGACTGCGA AGAGATCGAG GCGTCGGCCA ACGGGCTCGG CCGCATCGAA CGCGAACTGC CCGAGTGGCT GCAGGCCGAC GTCGCGATCC TCGGCGAACC GTCCGGCGGT TTCATCGAGG CCGGCTGCCA GGGCACGCTG CGAGTCGTGG TGAGCGCCAC CGGAACCCGG GCGCACTCCG CGCGATCCTG GTTGGGCGAC AACGCCATTC ACAAACTCGG CGCGGTCCTC GACCGGTTGG CCGCCTACCA GGCCCGCAGC ATCGACATCG ACGGCTGCGT CTACCGCGAG GGACTCTCCG CGGTGCGCAT CGACGGCGGC ATCGCGGGCA ACGTGATCCC CGACGCCGCC TCGGTCACCG TCAACTTCCG CTTCGCCCCC GACCGCACCG TCGACCAGGC GCTGGCCCAC GTCCACGAGG TCCTCGACGG ACTCGACGTC ACCGTCGAGC AGACCGACGC CGCCGCCGGA GCCCTGCCGG GGCTGACCAG GCCGGCGGCC GCGGCGCTGG TCGAGGCCGC CGGCGGACAG GCGCGGGCCA AGTACGGGTG GACCGACGTG GCGCGGTTCG CGGCGCTGGG GATCCCGGCC GTCAATTACG GTCCGGGGGA TCCGAACCTC GCCCACCGCG CGGACGAACG GGTCGACGTC GGCCAGATCA CCGCGACCAC CGAGGTGCTG CGCCGGTATT TAACCGCTTG A
|
Protein sequence | MAPSSALRAS GSSLDLRGDP VELTAALVDI PSESRHEQRI ADEIEAALRE QTDGFEIIRN GDAVLARTNR GLPSRVLLAG HIDTVPAADN VPSRRVGDEL HGCGTSDMKS GDAVFLHLAA TVADPAHDLT LVMYDCEEIE ASANGLGRIE RELPEWLQAD VAILGEPSGG FIEAGCQGTL RVVVSATGTR AHSARSWLGD NAIHKLGAVL DRLAAYQARS IDIDGCVYRE GLSAVRIDGG IAGNVIPDAA SVTVNFRFAP DRTVDQALAH VHEVLDGLDV TVEQTDAAAG ALPGLTRPAA AALVEAAGGQ ARAKYGWTDV ARFAALGIPA VNYGPGDPNL AHRADERVDV GQITATTEVL RRYLTA
|
| |