Gene Mkms_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3961 
SymbolprfA 
ID4611900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4173648 
End bp4174721 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content69% 
IMG OID639793644 
Productpeptide chain release factor 1 
Protein accessionYP_939943 
Protein GI119869991 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.287406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTC CCACCACAGC GATTGACGCG TTGCTCGCCG AGCACGCCGA CCTGGAGCGT 
CAGCTCGCCG ACCCCGCGCT GCACGCCGAC GCCGGCAAGG CGCGCAAGGC CGGTCGCCGG
TTCGCGCAGC TGGCGCCGAT CGTCGCCACG TACCGAAAAC TCGAAGCCGC CCGCGGTGAC
CTCGAGGCGG CCCGTGAGCT CGGCGCCGAC GATGCGTCGT TCGCCGCCGA GGTGCCCGAA
CTCGAGGCCA CCGTCGACCA ACTCGAGACC CAGCTGTCGG ATCTGCTGGC GCCGCGTGAT
CCGCACGACG CCGACGACAT CGTGCTCGAG GTGAAGTCGG GGGAGGGCGG CGAGGAGTCG
GCCCTGTTCG CCGCCGACCT CGCGCGGATG TACATCCGGT ACGCCGAACG GCACGGCTGG
TCGGTCACGA TCCTCGACGA GACGACGTCC GACCTCGGTG GATACAAGGA CGCAACGCTC
TCGATCCGCA GCAAGGGCGA CTCGGCCGAC GGGGTGTGGT CGCGGCTGAA GTTCGAAGGC
GGCGTGCACC GCGTGCAACG GGTGCCGGTC ACCGAATCGC AGGGCCGCGT CCACACGTCG
GCGGCCGGCG TGCTCGTCTA CCCCGAACCC GAAGAGGTCG AACAGGTCCA GATCGACGAG
TCCGACCTGC GCATCGACGT CTACCGGTCC TCGGGTAAGG GCGGTCAGGG CGTCAACACC
ACCGACTCGG CCGTGCGGAT CACCCACCTG CCGACCGGCA TCGTCGTCAC CTGCCAGAAC
GAACGCTCTC AGCTGCAGAA CAAGGCGCGT GCCATGCAGG TGCTCGCCGC CCGGTTGCAG
TCGCTCGCCG AGGAGCAGGC CTCGGCCGAT GCGTCGGCCG ACCGCGCCAG CCAGATCCGC
ACCGTCGACC GCAGCGAGCG GATCCGTACG TACAACTTCC CGGAGAACCG GATCGCCGAC
CACCGCATCA ACTTCAAGGC GCACAACCTC GACCAGGTGC TCGACGGCGA TCTCGACCCG
CTGTTCGACG CGCTGGCGGC CGCCGACAAA CAGGCGCGAC TGCAGAGCTC ATGA
 
Protein sequence
MSAPTTAIDA LLAEHADLER QLADPALHAD AGKARKAGRR FAQLAPIVAT YRKLEAARGD 
LEAARELGAD DASFAAEVPE LEATVDQLET QLSDLLAPRD PHDADDIVLE VKSGEGGEES
ALFAADLARM YIRYAERHGW SVTILDETTS DLGGYKDATL SIRSKGDSAD GVWSRLKFEG
GVHRVQRVPV TESQGRVHTS AAGVLVYPEP EEVEQVQIDE SDLRIDVYRS SGKGGQGVNT
TDSAVRITHL PTGIVVTCQN ERSQLQNKAR AMQVLAARLQ SLAEEQASAD ASADRASQIR
TVDRSERIRT YNFPENRIAD HRINFKAHNL DQVLDGDLDP LFDALAAADK QARLQSS