Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3961 |
Symbol | prfA |
ID | 4611900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 4173648 |
End bp | 4174721 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639793644 |
Product | peptide chain release factor 1 |
Protein accession | YP_939943 |
Protein GI | 119869991 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.287406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCTC CCACCACAGC GATTGACGCG TTGCTCGCCG AGCACGCCGA CCTGGAGCGT CAGCTCGCCG ACCCCGCGCT GCACGCCGAC GCCGGCAAGG CGCGCAAGGC CGGTCGCCGG TTCGCGCAGC TGGCGCCGAT CGTCGCCACG TACCGAAAAC TCGAAGCCGC CCGCGGTGAC CTCGAGGCGG CCCGTGAGCT CGGCGCCGAC GATGCGTCGT TCGCCGCCGA GGTGCCCGAA CTCGAGGCCA CCGTCGACCA ACTCGAGACC CAGCTGTCGG ATCTGCTGGC GCCGCGTGAT CCGCACGACG CCGACGACAT CGTGCTCGAG GTGAAGTCGG GGGAGGGCGG CGAGGAGTCG GCCCTGTTCG CCGCCGACCT CGCGCGGATG TACATCCGGT ACGCCGAACG GCACGGCTGG TCGGTCACGA TCCTCGACGA GACGACGTCC GACCTCGGTG GATACAAGGA CGCAACGCTC TCGATCCGCA GCAAGGGCGA CTCGGCCGAC GGGGTGTGGT CGCGGCTGAA GTTCGAAGGC GGCGTGCACC GCGTGCAACG GGTGCCGGTC ACCGAATCGC AGGGCCGCGT CCACACGTCG GCGGCCGGCG TGCTCGTCTA CCCCGAACCC GAAGAGGTCG AACAGGTCCA GATCGACGAG TCCGACCTGC GCATCGACGT CTACCGGTCC TCGGGTAAGG GCGGTCAGGG CGTCAACACC ACCGACTCGG CCGTGCGGAT CACCCACCTG CCGACCGGCA TCGTCGTCAC CTGCCAGAAC GAACGCTCTC AGCTGCAGAA CAAGGCGCGT GCCATGCAGG TGCTCGCCGC CCGGTTGCAG TCGCTCGCCG AGGAGCAGGC CTCGGCCGAT GCGTCGGCCG ACCGCGCCAG CCAGATCCGC ACCGTCGACC GCAGCGAGCG GATCCGTACG TACAACTTCC CGGAGAACCG GATCGCCGAC CACCGCATCA ACTTCAAGGC GCACAACCTC GACCAGGTGC TCGACGGCGA TCTCGACCCG CTGTTCGACG CGCTGGCGGC CGCCGACAAA CAGGCGCGAC TGCAGAGCTC ATGA
|
Protein sequence | MSAPTTAIDA LLAEHADLER QLADPALHAD AGKARKAGRR FAQLAPIVAT YRKLEAARGD LEAARELGAD DASFAAEVPE LEATVDQLET QLSDLLAPRD PHDADDIVLE VKSGEGGEES ALFAADLARM YIRYAERHGW SVTILDETTS DLGGYKDATL SIRSKGDSAD GVWSRLKFEG GVHRVQRVPV TESQGRVHTS AAGVLVYPEP EEVEQVQIDE SDLRIDVYRS SGKGGQGVNT TDSAVRITHL PTGIVVTCQN ERSQLQNKAR AMQVLAARLQ SLAEEQASAD ASADRASQIR TVDRSERIRT YNFPENRIAD HRINFKAHNL DQVLDGDLDP LFDALAAADK QARLQSS
|
| |