Gene Mkms_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3948 
Symbol 
ID4611887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4162198 
End bp4162644 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content70% 
IMG OID639793631 
Producthypothetical protein 
Protein accessionYP_939930 
Protein GI119869978 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000500606 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0034506 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCGCGC CCATGTGGAG CATGGTCGCG CTCATCGGCG TGCTGCTGCT TGTCGTCATC 
GCGCTGACCT ACCGCCTGTG GAAGCTGCGC CAGGTCGGCG GTACTGCGGC GATCCTGCGT
GACGTGCCCG CGGTCGGCGG TCACGGCTGG CGGCACGGGG TCGTGCGGTA CCGCGGCGGC
GAAGCCAGCT TCTACCGGCT GTCCAGCCTG CGCTGGTGGC CCGATCGCCG GCTGAGCCGG
CGGGGTCTGG AAATCGTGTC TCGGCGCAGT CCGCGCGGCG ACGAATTCGA CATCATGACC
CACGAGATCG TCGTGCTCGA ACTGCGCGAC ACCAGCCCCG AGCGTCGGCG CGGTTACGAG
ATCGCGCTCG ATCGGGGAGC GCTCACCGCA TTCCTGTCGT GGCTCGAATC GCGGCCGTCG
CCGCGCGCCC GGCGCCGCAG TTACTGA
 
Protein sequence
MSAPMWSMVA LIGVLLLVVI ALTYRLWKLR QVGGTAAILR DVPAVGGHGW RHGVVRYRGG 
EASFYRLSSL RWWPDRRLSR RGLEIVSRRS PRGDEFDIMT HEIVVLELRD TSPERRRGYE
IALDRGALTA FLSWLESRPS PRARRRSY