Gene Mkms_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3897 
Symbol 
ID4611832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4103196 
End bp4104266 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content69% 
IMG OID639793576 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_939879 
Protein GI119869927 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.47708 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGAAG AGCCGAGGCT CCCGGTGAAC GGCCCGCTGG CCGGCATCCG GATCCTCGAG 
GTCGGTGTCA TGCTGGCCGG CCCGTACGCG ACGATGATGC TCGCGGACCT GGGTGCCGAG
GTGACGAAGG TCGAGCCGCC CGGCGGTGAG ATTTCGCGCC AGGTCAGCGA CAGCTACTTC
GCCAGCCTCA ACCGCAACAA GCGCAGCGTC TGTCTGGATC TGCAGTCCGC CGACGGCCAA
CGACGTCTGG GCGAGTTGGT CGCGGAATCG CATGCGCTGC TGGTGAACAT GAAACCGTCG
GTGATCCGCC GCCTCGGTTT GACCTACGAG GCGCTGCGCA AGCACAACGA GAAGATCGTG
TGCGTGGCGA TGACGGGGTT CGGGTTGGAC GGCGGGGACG ATCCGGCGTT CGACTATGTG
ATCCAGGCGG CCACCGGCGT CGCGGCGATG ACCGGCGAGC CCGACGGCCC CCCGACGCTC
CCCGGCTATT CGTCGGCCGA CAACTCGACC GGGCTGACCG CCGCCCTCGG TCTGCTCGCG
ATGATCGTCT CCGGTCGCGG CGGACAGGTC GACGTCTCCC TGCGCGATGT GATGCTCTCG
CAGCTGAACT ACCGGGCGGC GGCATACCTG AACGACGGGG TGGCGCCGCG TCGCCATCCC
AACGGCGCGC ATTCGTTCTA CGTTCCGGCG CAACTGTTCC CGACCGCCGA CGGCTATCTG
GCGCTGTTCA TCACCCACGA CGGGTTCTGG CGGCTGTTCG CGTCCGAGGC CGGGATCGAG
GGTTACCCCA CCATGGCCGA ACGGGCAGCG CAGCGTGAGG AGGTGCTCGC CGTCGTCACC
GAGGCGCTCG CGAAGGACAC CGCGAAGGGA TGGGAGGCGC GCCTGCGCCC CCTCGGCATC
CCGGCCGCGG CCGTTCGCGG GTTACCCGAC GCGCTCGACG AGACACCGGA GGCACTCGTG
ACCGCCGGTG ACTTCCGGTT GGTCGGCAGC CCCATCCGCA TCGCCGGTTA CCGACCCGAT
TACCGCCCGC CGCCACAACT TCCGGAGGCG GCCACCGGTC AGTCGTCGTA G
 
Protein sequence
MREEPRLPVN GPLAGIRILE VGVMLAGPYA TMMLADLGAE VTKVEPPGGE ISRQVSDSYF 
ASLNRNKRSV CLDLQSADGQ RRLGELVAES HALLVNMKPS VIRRLGLTYE ALRKHNEKIV
CVAMTGFGLD GGDDPAFDYV IQAATGVAAM TGEPDGPPTL PGYSSADNST GLTAALGLLA
MIVSGRGGQV DVSLRDVMLS QLNYRAAAYL NDGVAPRRHP NGAHSFYVPA QLFPTADGYL
ALFITHDGFW RLFASEAGIE GYPTMAERAA QREEVLAVVT EALAKDTAKG WEARLRPLGI
PAAAVRGLPD ALDETPEALV TAGDFRLVGS PIRIAGYRPD YRPPPQLPEA ATGQSS