Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3855 |
Symbol | |
ID | 4611790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 4070108 |
End bp | 4070932 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639793535 |
Product | 3-alpha-hydroxysteroid dehydrogenase |
Protein accession | YP_939838 |
Protein GI | 119869886 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.420893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCACA TCGAGCAGCT GTGGCGCTAT GACGGCAAGC GGGTCGTCGT CACCGGCTGC GCGTCGGGGA TCGGCGCGCA CCTCGTGCGG CAGCTGAGCG AACTCGGCGC CCGGGTGGTG GGTCTGGACA TGCGGCGCCC CGCGGCGGAC CTCGACGAGT TCGGCGAGAT CGACCTCTCC GACCGGGCGT CGATCGACAC CGCGGTGGCG GCGATCGGCG GTGACGTCGA CGTGCTGTTC AACGTCGCCG GCGTGTCCTC GGGCATCGGA GATCCGCCAC TGGTGGTGCG GATCAACTTC CTCGGCACCC GGCACTTCAC CGAGTCGATG CTGCCGCGGA TGCGGCCGGG ATCGTCGATC GTCAGCGTTT CCTCGCTCGC GGCGGCGTCG TACCTGGACA ACGCGCCGAC CACCGCCGGT CTGGTGCGCA CAGCCACCAT GGAGGACGGG ATCGCCTGGT GCGCCGAACA TCCCGAGGCG CTCGCCGACG GCGGCTACCG GTTGGCCAAA GAGGCGCTCA TCCTCTACAC CATGCGCAGC GCCGGCCCGC TGGGTGCGCG CGGCATCCGC ATCAACTGCA CGGGGCCCGG TGTGACCGAG ACGCCGATCC TCGATCAGTT GCGGACCGCG TACGGTCCGG CCTTCCTCGA CGACATCCCC AAACCGCTCG GCCGGGTGTC GGATCCGGAG GAGCAGTCCG CGGTGTTGAC ATTCCTCGGC AGCAACGCCG CCAGTTACAT CACCGGCCAG GTCATCTGGG TCGACGGTGG GAACCTCGCC GGCCGGGTGG CCGCGAGTCT AGACGCGACT TCGGAAGGGA AGTGA
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Protein sequence | MSHIEQLWRY DGKRVVVTGC ASGIGAHLVR QLSELGARVV GLDMRRPAAD LDEFGEIDLS DRASIDTAVA AIGGDVDVLF NVAGVSSGIG DPPLVVRINF LGTRHFTESM LPRMRPGSSI VSVSSLAAAS YLDNAPTTAG LVRTATMEDG IAWCAEHPEA LADGGYRLAK EALILYTMRS AGPLGARGIR INCTGPGVTE TPILDQLRTA YGPAFLDDIP KPLGRVSDPE EQSAVLTFLG SNAASYITGQ VIWVDGGNLA GRVAASLDAT SEGK
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