Gene Mkms_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3855 
Symbol 
ID4611790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4070108 
End bp4070932 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content69% 
IMG OID639793535 
Product3-alpha-hydroxysteroid dehydrogenase 
Protein accessionYP_939838 
Protein GI119869886 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.420893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACA TCGAGCAGCT GTGGCGCTAT GACGGCAAGC GGGTCGTCGT CACCGGCTGC 
GCGTCGGGGA TCGGCGCGCA CCTCGTGCGG CAGCTGAGCG AACTCGGCGC CCGGGTGGTG
GGTCTGGACA TGCGGCGCCC CGCGGCGGAC CTCGACGAGT TCGGCGAGAT CGACCTCTCC
GACCGGGCGT CGATCGACAC CGCGGTGGCG GCGATCGGCG GTGACGTCGA CGTGCTGTTC
AACGTCGCCG GCGTGTCCTC GGGCATCGGA GATCCGCCAC TGGTGGTGCG GATCAACTTC
CTCGGCACCC GGCACTTCAC CGAGTCGATG CTGCCGCGGA TGCGGCCGGG ATCGTCGATC
GTCAGCGTTT CCTCGCTCGC GGCGGCGTCG TACCTGGACA ACGCGCCGAC CACCGCCGGT
CTGGTGCGCA CAGCCACCAT GGAGGACGGG ATCGCCTGGT GCGCCGAACA TCCCGAGGCG
CTCGCCGACG GCGGCTACCG GTTGGCCAAA GAGGCGCTCA TCCTCTACAC CATGCGCAGC
GCCGGCCCGC TGGGTGCGCG CGGCATCCGC ATCAACTGCA CGGGGCCCGG TGTGACCGAG
ACGCCGATCC TCGATCAGTT GCGGACCGCG TACGGTCCGG CCTTCCTCGA CGACATCCCC
AAACCGCTCG GCCGGGTGTC GGATCCGGAG GAGCAGTCCG CGGTGTTGAC ATTCCTCGGC
AGCAACGCCG CCAGTTACAT CACCGGCCAG GTCATCTGGG TCGACGGTGG GAACCTCGCC
GGCCGGGTGG CCGCGAGTCT AGACGCGACT TCGGAAGGGA AGTGA
 
Protein sequence
MSHIEQLWRY DGKRVVVTGC ASGIGAHLVR QLSELGARVV GLDMRRPAAD LDEFGEIDLS 
DRASIDTAVA AIGGDVDVLF NVAGVSSGIG DPPLVVRINF LGTRHFTESM LPRMRPGSSI
VSVSSLAAAS YLDNAPTTAG LVRTATMEDG IAWCAEHPEA LADGGYRLAK EALILYTMRS
AGPLGARGIR INCTGPGVTE TPILDQLRTA YGPAFLDDIP KPLGRVSDPE EQSAVLTFLG
SNAASYITGQ VIWVDGGNLA GRVAASLDAT SEGK