Gene Mkms_3405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3405 
Symbol 
ID4611332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3571404 
End bp3572141 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID639793078 
Producthypothetical protein 
Protein accessionYP_939389 
Protein GI119869437 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.146705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCTG ATGTCTGGCA GCAACATTCG TTGCTACAGC TGGCCGAGGT GGACGCCGGG 
CTGGCGCGGA TCGAACACCG GGTGCGCAAG CTGCCCGAAC AGGACGAACT CGACCGGGTC
CGCGCCGAAC ACGGTGCGGC CACCGACAAG GTCGCGGTGC TCGGCATCGC GATGGACGAT
CTCGACGAGC AGGTGGCCAA GTTCGAGTCC GAGATCGACG CCGTCCGTCA GCGCGAAGAC
CGCGACCGGG CCCTGCTGGA GGGTGACAGC GTCGGCGCCA AACAGGTCGC CGAGTTGCAG
CACGAACTCG AGACGCTCGA ACGTCGCCAG GCGAGCCTCG AGGACTCCCT GCTGGAGCTG
ATGGAGCGCC GCGAGGAACT GGCCGCCCAG CGCGCGGCGG AACTCGCGCG CGTCGACGAA
CTGCAGATCA CGCTGTCGGC AGCTCAGCGC GCGGTCGCCG ACGCGGTGGC CGAACTGGAC
GGATCCCGGC AGGAGAACCT CAGCCGGCGC GAGGAGCTGC TGGGGTCCCT GCAGTCCGAC
CTCGTCGACC TCTACGAGCG GCAACGAGCC CGTGGCGGTG CGGGCGCCGG GCAGTTGCAG
GGTCGCCGAT GCGGCGCCTG CCGCCTCGAG ATCGACCGGG GCGAGATGGC CCGCATCTCG
GCCGCGCCCG ACGACGAGGT GCTGCGCTGC CCCGAGTGCA ACGCAATTTT GGTGCGCGCG
GAGGGCTTCA AGAAGTGA
 
Protein sequence
MKADVWQQHS LLQLAEVDAG LARIEHRVRK LPEQDELDRV RAEHGAATDK VAVLGIAMDD 
LDEQVAKFES EIDAVRQRED RDRALLEGDS VGAKQVAELQ HELETLERRQ ASLEDSLLEL
MERREELAAQ RAAELARVDE LQITLSAAQR AVADAVAELD GSRQENLSRR EELLGSLQSD
LVDLYERQRA RGGAGAGQLQ GRRCGACRLE IDRGEMARIS AAPDDEVLRC PECNAILVRA
EGFKK