Gene Mkms_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3038 
Symbol 
ID4610871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3180238 
End bp3181104 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID639792707 
Productacyl-CoA thioesterase 
Protein accessionYP_939022 
Protein GI119869070 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.683464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCCC GGGTGGTAGC GCGGACACTC TCGGACATCC TGACGACCCT GGACGTCGAA 
CAGATCGCGG ATGACGAGTT CCTCGCGACG CAGATGGACA ACGCGGCGCA CCACATCGTC
GGCGGGCACA TCGCTGCCCA GGCGCTCATG TCGGCGAGCC GGACCGTCAG CGCCGACCGC
ACCCCGCACA GCATGCACGT CTACCTGTTG CGGGCCGGCG ACGCGCGCCG ACCGGTGCAC
TTCGAGATCA CCCGTCTGCG CGACGGCGGC GTGCTGTCCT CGCGGCGGGT GCTGGCGCGC
CAGGACGACC AGGTGCTGCT CGAAGCGCTC GTATCGTTCA CCGCACCGCT GGACAGCTTC
GAACACCAGC AGCCGATCCC CGACGTCCCG GGCCCGGAGT CGCTGCCGTC GGTGCAGGAA
CAGTTGAGCC CGTACGCGGA TGAGCACGAC GGGCACTGGG TGCGCCCGCA GCCGCTGGAT
CTGCGATACG TCGACCCGCC GGCACGGCTG GCGCTCGATC GGCCCGACCC GTCGCCGCGC
ATCAGGCTGT GGTGGCGTCC CGCCGAACCG ATGCCCGACG ACCCCATCCT CAACAGCTGC
CTGTTGACGT ACGTATCGGG CACCGCGCTG CTGGAGACGG CGATGGTGGT GCGCCGGACG
ACGCCGCTGA CGTCCTTCTC GGCACTGATC GACCACGCGG TGTGGTTCCA TCGGCCTGCC
GACTTCTCGG ACTGGGTGCT CTCGGATGCC GTCGCTCCCA GCGGTGTCCA CGGTCGCGCC
CTGGCCACCG CCACGATGTA CAACCGCACC GTAGCGCTCG TCTGCACCGC CACCCAGGAG
ATCTACTTCG GCCGCGACCG CCGTTGA
 
Protein sequence
MMPRVVARTL SDILTTLDVE QIADDEFLAT QMDNAAHHIV GGHIAAQALM SASRTVSADR 
TPHSMHVYLL RAGDARRPVH FEITRLRDGG VLSSRRVLAR QDDQVLLEAL VSFTAPLDSF
EHQQPIPDVP GPESLPSVQE QLSPYADEHD GHWVRPQPLD LRYVDPPARL ALDRPDPSPR
IRLWWRPAEP MPDDPILNSC LLTYVSGTAL LETAMVVRRT TPLTSFSALI DHAVWFHRPA
DFSDWVLSDA VAPSGVHGRA LATATMYNRT VALVCTATQE IYFGRDRR