Gene Mkms_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3002 
Symbol 
ID4610835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3139592 
End bp3140272 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID639792671 
Productmultidrug ABC transporter inner membrane protein 
Protein accessionYP_938986 
Protein GI119869034 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.377111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC TCGTACCGAG CGTGATCATC ACCTTGATCT ACTTCATGTT CGCCGACGTA 
CCGCATGCAC CCGGCACGCC GTCACCGTTC ACCAACGCCT GCCTGATCAT GCTCGGGGTG
TTTCCGCTCA TCGTGATGTT CCTCATCACG TCGATCACCA TGCAGCGGGA ACGGGTGTCG
GGAACGCTCG AGCGGATCCT GGCCACTCCC CTGCGCCGGG CCGATCTACT CGCCGCCTAC
GGCACCGCCT TCTCGCTCGC GGCGGCGGCC CAGGCCAGCC TGGCGTGCGT GGTCGCGTTC
TGGTTTCTGG GCTTCGAGAC CGCGGGCAGC CCGCTTCTGG TGATTGGCAT CGCCATCGTC
AACGCCGTGC TCGGCGTGGG GCTCGGGCTT CTGTGCAGCG CCTTCGCCCG CACCGAGTTC
CAGGCGGTCC AGTTCATGCC GCTGGTCATC GCCCCCCAGC TGCTGTTGTG CGGCATCATC
GTGCCGCGCA ACGCCCTGCC CGAATGGCTG CAGTGGGTCA GCAACGTCAT GCCGGCCAGC
TACGCCCTGG AGGCGCTGCG GGAGGTGAGC GCACACCCGG AACCGACGGC GACTGCGGTG
CGGGACATCG CGATCGTGGT GGCTTTCGCG GTGGTGGCCA TGTTCCTGGC CGCGGCCACC
CTGCGACGAA GGACACCGTA G
 
Protein sequence
MILLVPSVII TLIYFMFADV PHAPGTPSPF TNACLIMLGV FPLIVMFLIT SITMQRERVS 
GTLERILATP LRRADLLAAY GTAFSLAAAA QASLACVVAF WFLGFETAGS PLLVIGIAIV
NAVLGVGLGL LCSAFARTEF QAVQFMPLVI APQLLLCGII VPRNALPEWL QWVSNVMPAS
YALEALREVS AHPEPTATAV RDIAIVVAFA VVAMFLAAAT LRRRTP