| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_2449 |
|---|
| Symbol | |
|---|
| ID | 4616009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 2569815 |
|---|
| End bp | 2570483 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639792117 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_938436 |
|---|
| Protein GI | 119868484 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.553212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCG TGGCCGGTGT GGGCACACTC CGCGTCGGCA TCGTCGTTCC GAACCCGCCC
TTCACCGGAA TGCCGGGTGG GCTCGACGTC GACCTGGCCA ATGCGATCGC CGACGCCCTC
GGTGACCGGG CGGAGTTCGT CGACTACCGA ACCGTCGACG AGGTCCTCGA AGCGCTGGGC
AGCGGCGACG TCGACTGCGC GGCCGGCGGC CTCACGGCCA CCGACGGACC GGTCGCCTTC
GCCCCGCCCT ACCTCATCGC CGGCCAGGCG CTTGCCGTCG ACGCCGAGAA CCACCCGAAC
GTGCATTCCG TCGACGAGCT CGACGGACTC ACCGTCGCCG TGCAACGAGG GAGCGCCGCC
GAGCGGTTCG CGGCCCAGCT CAAGGGACCC GTCAAGCGAT GCGACCGGCT CGACATCGAC
GGATGTGATG CCATCGTCGC CCTGGCGCCT GTGCTGACCG AATACGCCAA GGGCCGATCC
GACGTCGACG TCGTGCAGAA GGGGTTGTCC GTCGAGCACA TCGCACTCGC GGTGGCCGGC
CACGACCAGC AGATGCTCAG CCGGATCACC GTCGCGCAGG CCGAGTTGGA GGAGGCGGGC
ACTCTGCAGC AGATCCGCCG TAGATGGTTG GGCAATCCGT ACGCCGATCA GAGCCTGGCC
GTGCACTGA
|
|---|
| Protein sequence | MTTVAGVGTL RVGIVVPNPP FTGMPGGLDV DLANAIADAL GDRAEFVDYR TVDEVLEALG
SGDVDCAAGG LTATDGPVAF APPYLIAGQA LAVDAENHPN VHSVDELDGL TVAVQRGSAA
ERFAAQLKGP VKRCDRLDID GCDAIVALAP VLTEYAKGRS DVDVVQKGLS VEHIALAVAG
HDQQMLSRIT VAQAELEEAG TLQQIRRRWL GNPYADQSLA VH
|
|---|
| |