| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_2413 |
|---|
| Symbol | |
|---|
| ID | 4613236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 2528938 |
|---|
| End bp | 2530101 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639792082 |
|---|
| Product | carbamoyl phosphate synthase small subunit |
|---|
| Protein accession | YP_938401 |
|---|
| Protein GI | 119868449 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.199018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAACA CGAGCGAGAC GCGAAGCGGA TCGCGCATCG ATGGGGCCGT GGCCCTTCTC
GTCCTGGAGG ACGGGCGGGT CTTCACCGGG GTGCCCTACG GGGCCGTCGG GCAGACACTC
GGTGAGGCGG TGTTCTCGAC CGGGATGTCG GGATACCAGG AGACTCTCAC CGACCCCAGT
TACTACGGCC AGATCGTGGT CGCGACCGCA CCGCAGATCG GCAACACGGG CTGGAACCAC
GAAGACGCCG AGAGCCGCGA CGACAGGATC TGGGTCGCCG GCTACGCCGT CCGCGACCCG
TCGCCGCGCG CCTCGAACTG GCGCGCCACC GGCACCCTCG ACGAGGAACT GGTCCGCCAG
GGCGTCGTCG GCATCGCCGG TATCGACACC CGCGCGCTGG TGCGCCATCT GCGCACCCGC
GGCGCCATGA AGGCGGGCAT CTTCAGCGGC GACGAGTCCG CCGCACCGAT GTCGGAACTG
CTCGAACGCG TCCGCAGCCA ACCGGGCATG CTCGGCGCGA GCCTGGCGGA CAAGGTCAGC
ACCGACGATG TCTACATCGT GGAACCCGAA GGGGCCCACC GGTTCACCGT CGCGGCGATC
GACCTCGGCA TCAAGACCAA CACCCCGCGC AACTTCGCGC GGCGCGGCAT CCGCAGCCAT
GTGCTGCCCG CCCGGGCCAC CTTCGAGCAG ATCGCCGACC TCAAACCCGA CGGGGTGTTC
CTGTCCAACG GGCCGGGCGA TCCGGCGGCG GCCGACCATG TCGTCGAGGT CACCCGGGAG
GTGCTGGGCG CCGGCATCCC GCTGTTCGGC ATCTGCTTCG GCAACCAGAT CCTCGGCCGG
GCTCTGGGCC GGGGCACCTA CAAGATGGTG TTCGGTCACC GCGGCATCAA CGTGCCGGTG
ATGGACCACG CGACCGGTCG CGTCGCGATC ACCGCGCAGA ACCACGGTTT CGCGCTCGAA
GGCGAAGCGG GTGAACGTTT CGACACCCCG TTCGGGGCGG CCGTCGTCAG CCACACCTGC
GCCAACGACG GGGTCGTCGA AGGCGTAAAA CTCGTCAACG GGCGGGCCTT CTCGGTGCAG
TACCACCCGG AGGCCGCGGC CGGCCCGCAC GATGCGAACT ATCTGTTCGA CCAGTTCGTC
GACCAGATGT CGGAGGAGAA GTAA
|
|---|
| Protein sequence | MSNTSETRSG SRIDGAVALL VLEDGRVFTG VPYGAVGQTL GEAVFSTGMS GYQETLTDPS
YYGQIVVATA PQIGNTGWNH EDAESRDDRI WVAGYAVRDP SPRASNWRAT GTLDEELVRQ
GVVGIAGIDT RALVRHLRTR GAMKAGIFSG DESAAPMSEL LERVRSQPGM LGASLADKVS
TDDVYIVEPE GAHRFTVAAI DLGIKTNTPR NFARRGIRSH VLPARATFEQ IADLKPDGVF
LSNGPGDPAA ADHVVEVTRE VLGAGIPLFG ICFGNQILGR ALGRGTYKMV FGHRGINVPV
MDHATGRVAI TAQNHGFALE GEAGERFDTP FGAAVVSHTC ANDGVVEGVK LVNGRAFSVQ
YHPEAAAGPH DANYLFDQFV DQMSEEK
|
|---|
| |