Gene Mkms_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2270 
Symbol 
ID4613447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2382522 
End bp2382998 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content74% 
IMG OID639791935 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_938258 
Protein GI119868306 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCGT TCGAAGACGT GGTGGCCGAA CACGGGCCCG TCGTGCTGCG GGTCTGCCGC 
GCCGTCGTGG GCCCGGTCGA CGCGGAGGAC GCCTGGTCGG AGACCTTCCT GTCGGCGCTG
CGGGCCTACC CCGACCTGCC CGCCGACGCC AACGTCGAGG CCTGGCTGGT GACGATCGCG
CACCGGCGCG CACTCGACGT CGGCCGCGCC AACTCCCGCC GGGCCGTCCC GACCGGCACC
GTCCCCGACA GCCCCGCCGT GGGCGGCGAC CCCGCGGACC GACACCCCGA CCTGTGGGCC
GCGCTCGAGT CACTGCCCAC CAAACAACGG CAGGCCGTCG CCTACCACCA CATCGCGGGT
CTGCCGTTCG CCGAGATCGC GGGACTGCTC GGCAACTCCC CCGACGCCGC CCGCCGCGCG
TGTGCCGACG GCTTGAGCAG ACTGCGCTCG ATCTACCGCG AGGAGCCCCT CCCATGA
 
Protein sequence
MRPFEDVVAE HGPVVLRVCR AVVGPVDAED AWSETFLSAL RAYPDLPADA NVEAWLVTIA 
HRRALDVGRA NSRRAVPTGT VPDSPAVGGD PADRHPDLWA ALESLPTKQR QAVAYHHIAG
LPFAEIAGLL GNSPDAARRA CADGLSRLRS IYREEPLP