Gene Mkms_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2058 
Symbol 
ID4613612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2182474 
End bp2183643 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content71% 
IMG OID639791724 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_938047 
Protein GI119868095 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.514677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGAC CGTTGGACGG TGTGAAGGTC GTCGAACTGG GTGTATGGGT CGCCGCTCCC 
GCCACCGGTG GCATCCTCGC CGACTGGGGC GCGGATGTGG TGAAGGTCGA GCCGCCGTCG
GGGGATCCCG CCCGGATGTT CGGCCGCATG CTCGGCATCG ACGGGGGCGT GAACCCACCC
TTCGAGATGG ACAACCGGTC CAAGCGCAGT GTCACGGTGG ACCTGACCTC CGCGCCGGGG
CGCGACGCCA TCCGCGAACT CCTCTGTACC GCCGATGTTT TCGTGACCAA CGTGCGGCCG
TCCGCACTGC GCCGCCTCGG GCTGGACTTC GAGACGCTCG CCGCCGCCAA CCCCCGGCTG
GTCTACGGTC TGATCACCGG GTACGGGTCG GCCGGGCCGG ACGCCGACCG CGCGGCGTAC
GACGTCGCCG CGTTCTGGGC GCGCGCCGGC CTGGCGCACC TGCTGACCCG ACCGGGCGAC
GATCCGCCTT TCCAGCGGGG TGGGATGGGT GATCACTCGG TCGGCATGAC GCTGGCGGCG
GCGGTGTGCG CGGCGCTGGT GTCGCGTGCC CGCACGGGAG TCGGTCAGCT GGTGACGACC
TCGCTCTACC GGCAGGGCAC CTACACGATC AGCTTCGACC TCAACACGTT CCTGCTCACC
GGGCGTCAGA TCGCCATCGG CCAACGGGAA TCGATGGGCA ACCCCTGTAT GAACAACTAC
GCCGCGGGCG ACGGGCGTCG GTTCTGGATC GTCGGGCTGG AGGGGGACCG GCACTGGCCC
GCGCTGTGCC GCAGCGTCGG ACGCCACGAC TGGCTGACCG ACGACCGGTT CGCCACCGGC
CGCTCGCGCG CGGTCAACGC CCGCGAACTC ATCGCCGAAC TCGACTCGAT CTTCGCCACC
AGACCGCTGG CCGAGTGGGC GGAGACCTTC GCGGCGGAAC CGGACCTGTT CTGGTCGCCG
ATCAACTCGC TGGAAGACGT CGTCGCCGAC GACCAGTTCC ACGCCGCCGG GGGCGCGGTG
TACGTCCCCG ACGGCGACGG GAGCATCCCG ATGGTCGCCA CACCCGCGGA CTTCCACGGC
ACCCCGTGCG AGCCACGTTC TGTCGCACCC CGTCTCGGCG AACACACCGA CGAGGTGCTG
GCCGATCCGG GCTCGGCGTG GCGGTCGTGA
 
Protein sequence
MAGPLDGVKV VELGVWVAAP ATGGILADWG ADVVKVEPPS GDPARMFGRM LGIDGGVNPP 
FEMDNRSKRS VTVDLTSAPG RDAIRELLCT ADVFVTNVRP SALRRLGLDF ETLAAANPRL
VYGLITGYGS AGPDADRAAY DVAAFWARAG LAHLLTRPGD DPPFQRGGMG DHSVGMTLAA
AVCAALVSRA RTGVGQLVTT SLYRQGTYTI SFDLNTFLLT GRQIAIGQRE SMGNPCMNNY
AAGDGRRFWI VGLEGDRHWP ALCRSVGRHD WLTDDRFATG RSRAVNAREL IAELDSIFAT
RPLAEWAETF AAEPDLFWSP INSLEDVVAD DQFHAAGGAV YVPDGDGSIP MVATPADFHG
TPCEPRSVAP RLGEHTDEVL ADPGSAWRS